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Published on: July 3, 2020
Semiparametric Bayesian inference for repeated fractional measurement data.
Ying Yang1, Peter Müller, Gary L Rosner
1Bristol-Myers Squibb Company, Plainsboro, NJ 08536, U.S.A.
This study introduces a novel Bayesian model for analyzing fractional data with boundary probabilities. The method uses latent variables and a Polya tree prior to effectively handle data between 0 and 1, including common outcomes in cancer studies.
Area of Science:
- Biostatistics
- Statistical Modeling
- Data Analysis
Background:
- Fractional data (0-1) with boundary masses pose challenges for standard statistical transformations like logit.
- Existing methods struggle with the positive probability at 0 and 1 inherent in many real-world datasets.
Purpose of the Study:
- To develop a flexible statistical model for inference on repeated fractional data, accommodating boundary masses.
- To introduce a Bayesian semiparametric approach capable of capturing complex random effects distributions.
Main Methods:
- Augmentation of the model with latent variables to permit positive probabilities at 0 and 1.
- Application of a linear mixed-effects model to these latent variables.
- Utilizing a Polya tree prior within a Bayesian framework for the random effects distribution.
Main Results:
- The proposed model successfully handles fractional data with point masses at 0 and 1.
- The Bayesian semiparametric approach effectively captures potential multimodality and skewness in random effects.
- Demonstrated utility through a simulation study and a real-world canine cancer dataset.
Conclusions:
- The novel Bayesian approach provides a robust method for analyzing fractional outcome data with boundary issues.
- The model's flexibility in handling random effects distributions enhances its applicability in various scientific fields.
- Effective implementation via Markov chain Monte Carlo simulation facilitates practical use in complex data analyses.
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