p53 Interacts with RNA polymerase II through its core domain and impairs Pol II processivity in vivo

Sunyoung Kim1, Sri Kripa Balakrishnan, David S Gross

  • 1Department of Biochemistry and Molecular Biology, Louisiana State University Health Sciences Center, Shreveport, Louisiana, United States of America.

Plos One
|August 11, 2011
PubMed

Insights

The tumor suppressor p53 interacts with RNA polymerase II (Pol II) to regulate gene transcription independently of DNA binding. This interaction can impair Pol II elongation, a function disrupted by cancer-associated mutations in p53.

Area of Science:

  • Molecular Biology
  • Cancer Biology
  • Gene Regulation

Background:

  • The tumor suppressor p53 is a transcription factor crucial for anti-proliferative responses to genotoxic stress.
  • p53's role in regulating gene transcription, particularly its DNA-binding-independent functions, remains less understood.

Purpose of the Study:

  • To investigate the mechanism by which p53 regulates gene transcription independent of its DNA-binding activity.
  • To explore the interaction between p53 and RNA polymerase II (Pol II).

Main Methods:

  • In vitro interaction assays and whole cell extracts to study p53-Pol II binding.
  • Yeast cell models with ectopic p53 expression, mutations in elongation factors, or Pol II inhibitors.
  • Analysis of Pol II density and transcriptional processivity at specific genes and reporter constructs.

Main Results:

  • Human p53 directly interacts with the large subunit of Pol II, mediated by p53's core domain and the Ser5-phosphorylated CTD of Pol II.
  • Ectopic p53 expression in yeast, under conditions impairing transcription elongation, causes sickness or lethality, which is suppressed by oncogenic p53 mutations.
  • p53 expression leads to increased Pol II density without increased transcript levels and reduces transcriptional processivity, indicating impaired elongation.

Conclusions:

  • p53 can regulate gene transcription through a novel mechanism involving direct interaction with Pol II, independent of DNA binding.
  • This DNA-binding-independent function of p53's core domain appears to inhibit Pol II elongation.
  • Oncogenic mutations in p53's core domain can inactivate this regulatory function, suggesting a new role in cancer development.

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