Related Experiment Video
Updated: May 30, 2026

Rapid, Seamless Generation of Recombinant Poxviruses using Host Range and Visual Selection
Published on: May 24, 2020
Poxvirus A46 protein binds to TIR domain-containing Mal/TIRAP via an α-helical sub-domain
Shun-Ichiro Oda1, Edward Franklin, Amir R Khan
1School of Biochemistry and Immunology, Trinity College Dublin, Dublin 2, Ireland.
Abstract:
Poxviruses are large DNA viruses that replicate in the cytosol and express numerous proteins to subvert the host immunity. Vaccinia virus A46 is a 25kDa protein that antagonizes multiple components of the Toll-like/interleukin-1 receptor (TLR) pathway by targeting cytosolic adaptor proteins. A46 binds to MyD88, Mal/TIRAP, TRIF and TRAM and suppresses the activation of NF-κB and interferon regulatory factors. Each of these cytosolic adaptors has a TIR domain that is critical for oligomerization during signaling. Although the structure of A46 is unknown, it has alternatively been described as an α/β-fold TIR domain, or an all α-helical Bcl-2 fold. Here we provide experimental evidence that the C-terminus of A46 adopts a dimeric α-helical structure, and that this segment retains the ability to interact with monomeric Mal. Furthermore, a peptide fragment of A46 termed VIPER, previously shown to retain the biological properties of the full-length protein, does not interact with Mal in vitro. In summary, we provide for the first time a biophysical analysis of the binding of a poxvirus protein to a TIR domain-containing adaptor molecule.
Insights
Vaccinia virus protein A46, crucial for subverting host immunity, has a dimeric alpha-helical C-terminus that binds to Mal adaptor proteins. This finding offers new insights into poxvirus immune evasion strategies.
Area of Science:
- Virology
- Immunology
- Structural Biology
Background:
- Poxviruses, like vaccinia virus, are large DNA viruses that replicate in the cytosol.
- They express proteins, such as A46, to counteract host immune responses.
- The Toll-like/interleukin-1 receptor (TLR) pathway is a key component of innate immunity targeted by viral proteins.
Purpose of the Study:
- To investigate the structural and binding properties of vaccinia virus protein A46.
- To elucidate the mechanism by which A46 interacts with host immune signaling adaptors.
- To provide a biophysical analysis of poxvirus protein-TIR domain interactions.
Main Methods:
- Experimental determination of the C-terminal structure of A46.
- Biophysical analysis of A46's interaction with the Mal adaptor protein.
- In vitro studies using peptide fragments of A46 (VIPER).
Main Results:
- The C-terminus of A46 forms a dimeric alpha-helical structure.
- This dimeric C-terminus retains the ability to bind to monomeric Mal.
- A peptide fragment, VIPER, previously shown to be biologically active, did not interact with Mal in vitro.
Conclusions:
- The study provides the first biophysical characterization of a poxvirus protein binding to a Toll-like/interleukin-1 receptor pathway adaptor.
- The dimeric alpha-helical C-terminus of A46 is critical for its interaction with Mal.
- These findings enhance our understanding of viral immune evasion mechanisms mediated by poxviruses.
More Related Videos
12:43Monitoring Activation of the Antiviral Pattern Recognition Receptors RIG-I And PKR By Limited Protease Digestion and Native PAGE
Published on: July 29, 2014
06:50Computational Prediction of Amino Acid Preferences of Potentially Multispecific Peptide-Binding Domains Involved in Protein-Protein Interactions
Published on: January 26, 2024
Related Concept Videos
Leaky Scanning
Protein Complex Assembly
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Subviral Agents
Tail-anchoring of Proteins in the ER Membrane
Retrovirus Life Cycles
Translocation of Proteins into the Mitochondria
Sorting of outer membrane proteins:
Mitochondrial outer membrane proteins are of two types: the transmembrane, beta-barrel porins, and the membrane-anchored, alpha-helical proteins. Beta-barrel porin precursors are translocated by the TOM complex and inserted into the outer mitochondrial membrane by the SAM complex. In contrast,...