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Related Concept Videos

Maxam-Gilbert Sequencing01:05

Maxam-Gilbert Sequencing

In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
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The...
Next-generation Sequencing03:00

Next-generation Sequencing

The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
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Although all next-generation methods use different technologies, they all share a set of standard features.
Sanger Sequencing01:57

Sanger Sequencing

DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
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Sequences01:29

Sequences

Sequences are fundamental mathematical objects consisting of ordered lists of numbers that follow a specific rule or pattern. Sequences are critical in various mathematical concepts, including calculus, series, and number theory. They can model real-world phenomena such as population growth, financial investments, and physical processes like the diminishing height of a bouncing ball.Each number in a sequence is referred to as a term. Typically, the terms are denoted as a1, a2, a3,…, where the...
Genomics02:02

Genomics

Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...

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Related Experiment Video

Updated: May 30, 2026

Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens
09:14

Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens

Published on: June 28, 2018

MaizeGDB becomes 'sequence-centric'.

Taner Z Sen1, Carson M Andorf, Mary L Schaeffer

  • 1USDA-ARS Corn Insects and Crop Genetics Research Unit, Ames, IA 50011, USA.

Database : the Journal of Biological Databases and Curation
|August 18, 2011
PubMed
Summary
This summary is machine-generated.

MaizeGDB enhances genetic and genomic data integration for maize (Zea mays ssp. mays) research. New features improve data accessibility and community involvement in annotation and resource development.

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Novel Sequence Discovery by Subtractive Genomics
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Novel Sequence Discovery by Subtractive Genomics

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Last Updated: May 30, 2026

Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens
09:14

Informatic Analysis of Sequence Data from Batch Yeast 2-Hybrid Screens

Published on: June 28, 2018

A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe
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A Deep-sequencing-assisted, Spontaneous Suppressor Screen in the Fission Yeast Schizosaccharomyces pombe

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Novel Sequence Discovery by Subtractive Genomics
09:40

Novel Sequence Discovery by Subtractive Genomics

Published on: January 25, 2019

Area of Science:

  • Plant genetics
  • Genomics
  • Bioinformatics

Background:

  • MaizeGDB serves as a central genetic and genomic information repository for maize (Zea mays ssp. mays).
  • Evolving researcher needs necessitate continuous updates and data integration.

Purpose of the Study:

  • To detail recent advancements and future plans for MaizeGDB.
  • To highlight community involvement in the database's development and prioritization.

Main Methods:

  • Integrating existing maize genetic data with new genome sequences (B73, Mo17, Palomero Toluqueño).
  • Implementing a genome browser for graphical representation of sequences.
  • Developing POPcorn, a portal for accessing independent maize projects and performing BLAST searches.
  • Initiating a joint MaizeGDB/PlantGDB project for community-driven genome annotation.

Main Results:

  • Enhanced integration of genetic data with maize genome sequences.
  • Introduction of a genome browser and the POPcorn portal.
  • Establishment of a collaborative project for maize genome annotation involving the research community.

Conclusions:

  • MaizeGDB is actively evolving to meet the needs of the maize research community.
  • Community engagement is crucial for the successful development and prioritization of biological databases.
  • New tools and resources improve data accessibility and collaborative research in maize genomics.