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Genetic diversity, recombination, and divergence in animal associated Penicillium dipodomyis
Daniel A Henk1, Matthew C Fisher
1Department of Infectious Disease Epidemiology, Imperial College, London, United Kingdom. d.henk@imperial.ac.uk
Abstract:
Penicillium dipodomyis is thought to be an exclusively asexual fungus associated with Kangaroo Rats, Dipodomys species, and is unique among Penicillium species in growing at 37°C but producing no known toxins. Lack of recombination within P. dipodomyis would result in limited adaptive flexibility but possibly enhance local adaptation and host selection via maintenance of favourable genotypes. Here, analysis of DNA sequence data from five protein-coding genes shows that recombination occurs within P. dipodomyis on a small spatial scale. Furthermore, detection of mating-type alleles supports outcrossing and a sexual cycle in P. dipodomyis. P. dipodomyis was a weaker competitor in in vitro assays with other Penicillium species found in association with Kanagaroo rats. Bayesian species level analysis suggests that the P. dipodomyis lineage diverged from closely related species also found in cheek pouches of Kangaroo Rats and their stored seeds about 11 million years ago, a similar divergence time as Dipodomys from its sister rodent taxa.
Insights
Recombination and sexual reproduction occur in Penicillium dipodomyis, a fungus associated with Kangaroo Rats. This finding challenges previous assumptions about this unique, non-toxigenic fungal species.
Area of Science:
- Mycology
- Fungal Genetics
- Evolutionary Biology
Background:
- Penicillium dipodomyis is a fungus primarily associated with Kangaroo Rats (Dipodomys species).
- It is unique for growing at 37°C and lacking known toxins.
- Previously, it was considered exclusively asexual, potentially limiting its adaptive flexibility.
Purpose of the Study:
- To investigate the reproductive strategies of Penicillium dipodomyis.
- To determine if recombination and sexual cycles occur within this fungal species.
- To understand the evolutionary history and ecological competitiveness of P. dipodomyis.
Main Methods:
- Analysis of DNA sequence data from five protein-coding genes.
- Detection of mating-type alleles.
- In vitro competition assays with other Penicillium species.
- Bayesian species-level phylogenetic analysis.
Main Results:
- Evidence of recombination occurring on a small spatial scale within P. dipodomyis.
- Detection of mating-type alleles, supporting outcrossing and a sexual cycle.
- P. dipodomyis demonstrated weaker competitive ability compared to other Penicillium species associated with Kangaroo Rats.
- Phylogenetic analysis indicated a divergence of the P. dipodomyis lineage approximately 11 million years ago.
Conclusions:
- Penicillium dipodomyis possesses a sexual cycle involving recombination, contrary to previous assumptions.
- The findings suggest a complex evolutionary history and ecological role for this fungus in association with Kangaroo Rats.
- The divergence time of P. dipodomyis aligns with the diversification of its rodent hosts.
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