Brain cell reservoirs of latent virus in presymptomatic HIV-infected individuals
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Updated: May 29, 2026

High Throughput In Vitro Assessment of Latency Reversing Agents on HIV Transcription and Splicing
Published on: January 22, 2019
Katherine A Thompson1, Catherine L Cherry, Jeanne E Bell
1Pathology Research Laboratory, Anatomical Pathology Unit, The Alfred Hospital, Department of Medicine, Monash University, Melbourne, Australia.
Abstract:
We detected HIV-1 DNA in pure populations of perivascular macrophages, parenchymal microglia, and astrocytes, isolated using laser microdissection from brain tissue of five untreated individuals who died in the presymptomatic stage of infection from non-HIV causes. HIV-1 DNA was detected in the three cell populations, most consistently in perivascular macrophages, without evidence of productive infection. The percentage of PCR reactions detecting HIV-1 DNA in perivascular macrophages correlated inversely with peripheral blood CD4 counts. These findings demonstrate that brain cell reservoirs of latent HIV-1 exist before pathological HIV encephalitis and suggest that perivascular macrophage trafficking of latent virus into the brain increases with immunosuppression.
Insights
Latent HIV-1 DNA exists in brain cells, including perivascular macrophages, microglia, and astrocytes, before HIV encephalitis develops. Macrophage trafficking of latent virus into the brain increases with immune suppression.
Area of Science:
- Neuroscience
- Immunology
- Virology
Background:
- Human Immunodeficiency Virus type 1 (HIV-1) establishes latent reservoirs in various tissues, including the brain.
- The presence and distribution of these latent reservoirs in specific brain cell types during the early, asymptomatic stages of infection are not fully understood.
- Understanding early viral reservoirs is crucial for developing effective eradication strategies.
Purpose of the Study:
- To investigate the presence and cellular localization of latent HIV-1 DNA in the brain during the presymptomatic stage of infection.
- To determine if specific brain cell populations harbor HIV-1 before the onset of pathological HIV encephalitis.
- To explore the relationship between peripheral immune status and viral load in brain cells.
Main Methods:
- Laser microdissection was used to isolate pure populations of perivascular macrophages, parenchymal microglia, and astrocytes from the brain tissue of five untreated individuals in the presymptomatic stage of HIV-1 infection.
- Polymerase Chain Reaction (PCR) was employed to detect HIV-1 DNA within these isolated cell populations.
- Peripheral blood CD4 counts were analyzed to assess the correlation with the presence of HIV-1 DNA in brain cells.
Main Results:
- HIV-1 DNA was detected in all three isolated brain cell populations: perivascular macrophages, microglia, and astrocytes.
- Detection of HIV-1 DNA was most consistent in perivascular macrophages.
- No evidence of productive HIV-1 infection was observed in these cells.
- A significant inverse correlation was found between the percentage of PCR reactions detecting HIV-1 DNA in perivascular macrophages and peripheral blood CD4 counts.
Conclusions:
- Latent HIV-1 reservoirs exist in key brain cell types, including perivascular macrophages, microglia, and astrocytes, prior to the development of pathological HIV encephalitis.
- Perivascular macrophages appear to be a primary site for latent HIV-1 in the brain during early infection.
- Increased immunosuppression, indicated by lower CD4 counts, correlates with increased trafficking of latent HIV-1 by perivascular macrophages into the brain.
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