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Related Concept Videos

Acid and Bases: Ka, pKa, and Relative Strengths02:35

Acid and Bases: Ka, pKa, and Relative Strengths

This lesson delves into a critical aspect of the relative strengths of acids and bases. The strength of an acid is evaluated by the acid dissociation into its conjugate base and a hydronium ion in water. The complete dissociation of a strong acid is confirmed with a very high concentration of hydronium ions. As a result, an incomplete dissociation process affirms a weak acid. Therefore, the equilibrium is in the forward direction for strong acids and backward for weak acids in these reactions.
pH Scale02:41

pH Scale

Hydronium and hydroxide ions are present both in pure water and in all aqueous solutions, and their concentrations are inversely proportional as determined by the ion product of water (Kw). The concentrations of these ions in a solution are often critical determinants of the solution’s properties and the chemical behaviors of its other solutes. Two different solutions can differ in their hydronium or hydroxide ion concentrations by a million, billion, or even trillion times. A common means of...
Calculating pH Changes in a Buffer Solution02:45

Calculating pH Changes in a Buffer Solution

A buffer can prevent a sudden drop or increase in the pH of a solution after the addition of a strong acid or base up to its buffering capacity; however, such addition of a strong acid or base does result in the slight pH change of the solution. The small pH change can be calculated by determining the resulting change in the concentration of buffer components, i.e., a weak acid and its conjugate base or vice versa. The concentrations obtained using these stoichiometric calculations can be used...
pH01:24

pH

The potential of hydrogen (pH) is a measure of the acidity or basicity of a water-based solution determined by the concentration of hydronium ions (H3O+). In one liter of pure water at neutral pH, there are 1×10−7 moles of hydronium ions. However, the extensive range of hydronium ion concentrations present in water-based solutions makes measuring pH in moles cumbersome. Therefore, a pH scale was developed to convert moles of hydronium ions into the negative logarithm of the hydronium ion...
pH01:24

pH

The potential of hydrogen (pH) is a measure of the acidity or basicity of a water-based solution determined by the concentration of hydronium ions (H3O+). In one liter of pure water at neutral pH, there are 1×10−7 moles of hydronium ions. However, the extensive range of hydronium ion concentrations present in water-based solutions makes measuring pH in moles cumbersome. Therefore, a pH scale was developed to convert moles of hydronium ions into the negative logarithm of the hydronium ion...
Ladder Diagrams: Acid–Base Equilibria01:32

Ladder Diagrams: Acid–Base Equilibria

Understanding the chemistry between the reagents is necessary for performing any experiment. To this end, scientists have designed a tool called a ladder diagram, which is a graphical representation that helps illustrate the chemistry of a system.
A ladder diagram for acid-base equilibria consists of a vertical axis that represents pH and horizontal bars (steps on the ladder) that help position all the pKa values in the system. At equilibrium, the pH value of the system corresponds to one of...

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Measuring Phagosome pH by Ratiometric Fluorescence Microscopy
14:39

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Published on: December 7, 2015

The pH ruler: a Java applet for developing interactive exercises on acids and bases.

Isabelle H Barrette-Ng1

  • 1Department of Biological Sciences, University of Calgary, Calgary, Alberta, Canada. mibarret@ucalgary.ca

Biochemistry and Molecular Biology Education : a Bimonthly Publication of the International Union of Biochemistry and Molecular Biology
|September 6, 2011
PubMed
Summary

This study introduces the pH ruler Java applet to help students visualize acid-base chemistry in biochemistry. The tool demonstrates amino acid protonation states at varying pH levels, enhancing understanding of biological acid-base concepts.

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Area of Science:

  • Biochemistry Education
  • Chemical Biology
  • Educational Technology

Background:

  • Teaching acid-base chemistry in introductory biochemistry is challenging.
  • Students often struggle with the abstract nature of acid-base concepts in biological contexts.
  • A need exists for intuitive and visual learning tools.

Purpose of the Study:

  • To develop a graphical tool for visualizing acid-base chemistry in biological systems.
  • To enhance student understanding of amino acid ionization states.
  • To facilitate active-learning exercises in biochemistry.

Main Methods:

  • Development of a Java applet named the pH ruler.
  • The applet visualizes protonation states of diprotic and triprotic amino acids.
  • Interactive manipulation of pH via a slider to observe real-time changes.

Main Results:

  • The pH ruler applet effectively visualizes amino acid ionization states.
  • Students can observe dynamic changes in protonation as pH varies.
  • The tool provides an intuitive and visual learning experience.

Conclusions:

  • The pH ruler applet is a valuable tool for teaching acid-base chemistry in biochemistry.
  • It supports the development of inquiry-based and active-learning modules.
  • The tool can be applied to advanced topics like protein structure and enzyme mechanisms.