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Updated: May 29, 2026

In Vivo Detection and Analysis of Rb Protein SUMOylation in Human Cells
Published on: November 2, 2017
Regulation of the Fanconi anemia pathway by a SUMO-like delivery network
Kailin Yang1, George-Lucian Moldovan, Patrizia Vinciguerra
1Department of Radiation Oncology, Dana-Farber Cancer Institute, Boston, Massachusetts 02115, USA;
Abstract:
The USP1/UAF1 complex deubiquitinates the Fanconi anemia protein FANCD2, thereby promoting homologous recombination and DNA cross-link repair. How USP1/UAF1 is targeted to the FANCD2/FANCI heterodimer has remained unknown. Here we show that UAF1 contains a tandem repeat of SUMO-like domains in its C terminus (SLD1 and SLD2). SLD2 binds directly to a SUMO-like domain-interacting motif (SIM) on FANCI. Deletion of the SLD2 sequence of UAF1 or mutation of the SIM on FANCI disrupts UAF1/FANCI binding and inhibits FANCD2 deubiquitination and DNA repair. The USP1/UAF1 complex also deubiquitinates PCNA-Ub, and deubiquitination requires the PCNA-binding protein hELG1. The SLD2 sequence of UAF1 binds to a SIM on hELG1, thus targeting the USP1/UAF1 complex to its PCNA-Ub substrate. We propose that the regulated targeting of USP1/UAF1 to its DNA repair substrates, FANCD2-Ub and PCNA-Ub, by SLD-SIM interactions coordinates homologous recombination and translesion DNA synthesis.
Insights
The USP1/UAF1 complex targets DNA repair proteins FANCD2 and PCNA via SUMO-like domain interactions. This mechanism coordinates DNA cross-link repair and translesion DNA synthesis.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- The USP1/UAF1 complex is crucial for DNA repair, deubiquitinating Fanconi anemia protein FANCD2 to promote homologous recombination and DNA cross-link repair.
- The precise mechanism by which USP1/UAF1 is recruited to its substrates, FANCD2/FANCI heterodimer and PCNA-Ub, remained unclear.
Purpose of the Study:
- To elucidate the targeting mechanism of the USP1/UAF1 complex to its DNA repair substrates.
- To investigate the role of SUMO-like domain (SLD) and SUMO-like domain-interacting motif (SIM) interactions in DNA repair pathway coordination.
Main Methods:
- Investigated UAF1 protein structure, identifying tandem SUMO-like domains (SLD1 and SLD2).
- Utilized deletion and mutation analyses to assess the binding of UAF1 SLD2 to FANCI SIM and hELG1 SIM.
- Examined the impact of these interactions on FANCD2 deubiquitination, DNA repair, and PCNA-Ub deubiquitination.
Main Results:
- UAF1 possesses SLD1 and SLD2 domains; SLD2 directly binds to a SIM on FANCI, essential for USP1/UAF1 recruitment to FANCD2.
- Disruption of SLD2-FANCI or SLD2-hELG1 interactions impaired FANCD2 deubiquitination and DNA repair.
- UAF1 SLD2 also binds to a SIM on hELG1, mediating USP1/UAF1 targeting to PCNA-Ub for deubiquitination.
Conclusions:
- The study reveals that SLD-SIM interactions mediate the specific targeting of USP1/UAF1 to FANCD2-Ub and PCNA-Ub substrates.
- This regulated targeting mechanism is critical for coordinating homologous recombination and translesion DNA synthesis pathways.
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