Related Experiment Video
Updated: May 29, 2026

Laser Micro-Irradiation to Study DNA Recruitment During S Phase
Published on: April 16, 2021
Induction of DNA damage signaling by oxidative stress in relation to DNA replication as detected using "click
Hong Zhao1, Jurek Dobrucki, Paulina Rybak
1Department of Pathology, New York Medical College, Valhalla, NY 10595, USA.
Abstract:
Induction of DNA damage by oxidants such as H(2) O(2) activates the complex network of DNA damage response (DDR) pathways present in cells to initiate DNA repair, halt cell cycle progression, and prepare an apoptotic reaction. We have previously reported that activation of Ataxia Telangiectasia Mutated protein kinase (ATM) and induction of γH2AX are among the early events of the DDR induced by exposure of cells to H(2) O(2) , and in human pulmonary carcinoma A549 cells, both events were expressed predominantly during S-phase. This study was designed to further explore a correlation between these events and DNA replication. Toward this end, we utilized 5-ethynyl-2'deoxyuridine (EdU) and the "click chemistry" approach to label DNA during replication, followed by exposure of A549 cells to H(2) O(2) . Multiparameter laser scanning cytometric analysis of these cells made it possible to identify DNA replicating cells and directly correlate H(2) O(2) -induced ATM activation and induction of γH2AX with DNA replication on a cell by cell basis. After pulse-labeling with EdU and exposure to H(2) O(2) , confocal microscopy was also used to examine the localization of DNA replication sites ("replication factories") versus the H2AX phosphorylation sites (γH2AX foci) in nuclear chromatin in an attempt to observe the absence or presence of colocalization. The data indicate a close association between DNA replication and H2AX phosphorylation in A549 cells, suggesting that these DNA damage response events may be triggered by stalled replication forks and perhaps also by induction of DNA double-strand breaks at the primary DNA lesions induced by H(2) O(2) .
Insights
Hydrogen peroxide (H2O2) triggers DNA damage response pathways. This study links H2O2-induced DNA damage response events, including ATM activation and γH2AX induction, directly to DNA replication in A549 cells.
Area of Science:
- Cellular Biology
- Molecular Biology
- Biochemistry
Background:
- Oxidative stress from hydrogen peroxide (H2O2) activates DNA damage response (DDR) pathways.
- Early DDR events include Ataxia Telangiectasia Mutated (ATM) protein kinase activation and γH2AX induction.
- In A549 cells, these events predominantly occur during S-phase, coinciding with DNA replication.
Purpose of the Study:
- To investigate the correlation between H2O2-induced DDR events and DNA replication.
- To determine if ATM activation and γH2AX induction are linked to active DNA synthesis.
- To examine the spatial relationship between DNA replication sites and H2AX phosphorylation.
Main Methods:
- Utilized 5-ethynyl-2'-deoxyuridine (EdU) labeling and click chemistry to identify replicating DNA.
- Exposed A549 cells to H2O2 after EdU pulse-labeling.
- Employed multiparameter laser scanning cytometry and confocal microscopy to analyze DDR events and replication.
- Correlated H2O2-induced ATM activation and γH2AX with DNA replication on a single-cell level.
- Examined colocalization of replication factories and γH2AX foci.
Main Results:
- Direct correlation established between H2O2-induced ATM activation, γH2AX induction, and ongoing DNA replication.
- Confocal microscopy revealed a close association between DNA replication sites and γH2AX foci.
- Data suggest DDR events are triggered by stalled replication forks or DNA double-strand breaks at H2O2-induced lesions.
Conclusions:
- DNA replication is closely associated with H2AX phosphorylation in A549 cells following H2O2 exposure.
- H2O2-induced DDR events may be initiated by replication fork stalling.
- These findings highlight the interplay between DNA replication stress and the DDR machinery.
Related Concept Videos
DNA Damage can Stall the Cell Cycle
DNA Damage Can Stall the Cell Cycle
The DNA Replication Fork
Overview of DNA Repair
Chemically...
Spontaneous and Induced Mutations
Homologous Recombination

