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Related Concept Videos

Primary Active Transport01:29

Primary Active Transport

In contrast to passive transport, active transport involves a substance being moved through membranes in a direction against its concentration or electrochemical gradient. There are two types of active transport: primary active transport and secondary active transport. Primary active transport utilizes chemical energy from ATP to drive protein pumps embedded in the cell membrane. With energy from ATP, the pumps transport ions against their electrochemical gradients—a direction they would not...
Primary Active Transport01:47

Primary Active Transport

In contrast to passive transport, active transport involves a substance being moved through membranes in a direction against its concentration or electrochemical gradient. There are two types of active transport: primary active transport and secondary active transport. Primary active transport utilizes chemical energy from ATP to drive protein pumps that are embedded in the cell membrane. With energy from ATP, the pumps transport ions against their electrochemical gradients—a direction they...
ATP Synthase: Structure01:18

ATP Synthase: Structure

ATP synthase or ATPase is among the most conserved proteins found in bacteria, mammals, and plants. This enzyme can catalyze a forward reaction in response to the electrochemical gradient, producing ATP from ADP and inorganic phosphate. ATP synthase can also work in a reverse direction by hydrolyzing ATP and generating an electrochemical gradient. Different forms of ATP synthases have evolved special features to meet the specific demands of the cell. Based on their specific feature, ATP...
ATP Synthase: Mechanism01:48

ATP Synthase: Mechanism

In animals, the mitochondrial F1F0 ATP synthase is the key protein that synthesizes ATP molecules through a complex catalytic mechanism. While the nuclear genome encodes the majority of ATP synthase subunits, the mitochondrial genome encodes some of the enzyme's most critical components. The formation of this multi-subunit enzyme is a complex multi-step process regulated at the level of transcription, translation, and assembly. Defects in one or more of these steps can result in decreased ATP...
ATP Driven Pumps II: P-type Pumps01:34

ATP Driven Pumps II: P-type Pumps

The P-type pumps are a large family of integral membrane transporter ATPases. They are divided into five major types based on substrate specificity, from I to V.
A typical P-type pump has three cytosolic domains: nucleotide-binding (N), phosphorylation (P), and activator (A) domains. These domains are connected to the membrane-spanning helices by short amino acid segments. ATP hydrolysis and covalent phosphoenzyme intermediate formation are crucial parts of the catalytic cycle. At the highly...
ATP Driven Pumps III: V-type Pumps01:30

ATP Driven Pumps III: V-type Pumps

V-type pumps are ATP-driven pumps found in the vacuolar membranes of plants, yeast, endosomal and lysosomal membranes of animal cells, plasma membranes of a few specialized eukaryotic cells, and some prokaryotes. They are also known as the V1Vo-ATPase, that couple ATP hydrolysis to transport protons against a concentration gradient.
The peripheral or cytosolic V1 domain with eight subunits is involved in ATP hydrolysis. The integral or transmembrane V0 domain containing at least five subunits...

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Related Experiment Video

Updated: May 29, 2026

Measuring Cation Transport by Na,K- and H,K-ATPase in Xenopus Oocytes by Atomic Absorption Spectrophotometry: An Alternative to Radioisotope Assays
12:48

Measuring Cation Transport by Na,K- and H,K-ATPase in Xenopus Oocytes by Atomic Absorption Spectrophotometry: An Alternative to Radioisotope Assays

Published on: February 19, 2013

Ouabain binding site in a functioning Na+/K+ ATPase.

Walter Sandtner1, Bernhard Egwolf2, Fatemeh Khalili-Araghi3

  • 1Department of Pharmacology, Medical University of Vienna, Waehringer Strasse 13A, 1090 Vienna, Austria.

The Journal of Biological Chemistry
|September 14, 2011
PubMed
Summary
This summary is machine-generated.

Ouabain binds to the Na(+)/K(+) ATPase at two distinct sites along its ion pathway. This study proposes a sequential binding mechanism for cardiotonic steroids, clarifying their action in heart failure treatment.

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Chemical Modification of the Tryptophan Residue in a Recombinant Ca2+-ATPase N-domain for Studying Tryptophan-ANS FRET
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Measuring Nucleotide Binding to Intact, Functional Membrane Proteins in Real Time
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Measuring Nucleotide Binding to Intact, Functional Membrane Proteins in Real Time

Published on: March 11, 2021

Related Experiment Videos

Last Updated: May 29, 2026

Measuring Cation Transport by Na,K- and H,K-ATPase in Xenopus Oocytes by Atomic Absorption Spectrophotometry: An Alternative to Radioisotope Assays
12:48

Measuring Cation Transport by Na,K- and H,K-ATPase in Xenopus Oocytes by Atomic Absorption Spectrophotometry: An Alternative to Radioisotope Assays

Published on: February 19, 2013

Chemical Modification of the Tryptophan Residue in a Recombinant Ca2+-ATPase N-domain for Studying Tryptophan-ANS FRET
12:07

Chemical Modification of the Tryptophan Residue in a Recombinant Ca2+-ATPase N-domain for Studying Tryptophan-ANS FRET

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Measuring Nucleotide Binding to Intact, Functional Membrane Proteins in Real Time
08:33

Measuring Nucleotide Binding to Intact, Functional Membrane Proteins in Real Time

Published on: March 11, 2021

Area of Science:

  • Biochemistry
  • Molecular Biology
  • Cardiovascular Physiology

Background:

  • The Na(+)/K(+) ATPase (sodium-potassium adenosine triphosphatase) is a vital integral membrane protein.
  • Cardiotonic steroid derivatives, like ouabain, are crucial inhibitors targeting this enzyme in heart failure treatment.
  • Previous functional and structural studies indicated widespread ouabain-sensitive sites, but precise binding locations remained debated.

Purpose of the Study:

  • To precisely map the binding sites of ouabain on the Na(+)/K(+) ATPase.
  • To elucidate the binding mechanism of cardiotonic steroids.
  • To reconcile functional observations with structural data regarding ouabain interaction.

Main Methods:

  • Utilized a spectroscopic approach to measure distances between fluorescent ouabain and lanthanide binding tags (LBTs).
  • Engineered five functional LBT-Na(+)/K(+) ATPase constructs expressed in Xenopus laevis oocytes.
  • Employed homology modeling to determine approximate ouabain positions based on spectroscopic data.

Main Results:

  • Spectroscopic data revealed two distinct distances between ouabain and LBTs, suggesting two binding sites.
  • Ouabain binds to an external site (low affinity) and a deeper, intracellular-facing site (high affinity).
  • The lactone ring of ouabain consistently faces outward in both binding configurations.

Conclusions:

  • Ouabain interacts with the Na(+)/K(+) ATPase at two distinct locations within the ion permeation pathway.
  • A sequential binding mechanism is proposed, explaining ouabain's interaction with the enzyme.
  • Findings provide a refined structural understanding of cardiotonic steroid action on the Na(+)/K(+) ATPase.