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Published on: April 25, 2022
Dysregulated microRNAs affect pathways and targets of biologic relevance in nasal-type natural killer/T-cell lymphoma
Siok-Bian Ng1, Junli Yan, Gaofeng Huang
1Department of Pathology, National University Health System, Singapore.
Abstract:
We performed a comprehensive genome-wide miRNA expression profiling of extranodal nasal-type natural killer/T-cell lymphoma (NKTL) using formalin-fixed paraffin-embedded tissue (n = 30) and NK cell lines (n = 6) compared with normal NK cells, with the objective of understanding the pathogenetic role of miRNA deregulation in NKTL. Compared with normal NK cells, differentially expressed miRNAs in NKTL are predominantly down-regulated. Re-expression of down-regulated miRNAs, such as miR-101, miR-26a, miR26b, miR-28-5, and miR-363, reduced the growth of the NK cell line and modulated the expression of their predicted target genes, suggesting the potential functional role of the deregulated miRNAs in the oncogenesis of NKTL. Taken together, the predicted targets whose expression is inversely correlated with the expression of deregulated miRNA in NKTL are significantly enriched for genes involved in cell cycle-related, p53, and MAPK signaling pathways. We also performed immunohistochemical validation for selected target proteins and found overexpression of MUM1, BLIMP1, and STMN1 in NKTL, and notably, a corresponding increase in MYC expression. Because MYC is known to cause repression of miRNA expression, it is possible that MYC activation in NKTL may contribute to the suppression of the miRNAs regulating MUM1, BLIMP1, and STMN1.
Insights
MicroRNA (miRNA) deregulation, primarily down-regulation, is implicated in natural killer/T-cell lymphoma (NKTL) pathogenesis. Restoring specific miRNAs suppressed tumor growth, highlighting their crucial role in NKTL development.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Extranodal natural killer/T-cell lymphoma (NKTL) is an aggressive non-Hodgkin lymphoma.
- The role of microRNA (miRNA) deregulation in NKTL oncogenesis remains incompletely understood.
Purpose of the Study:
- To investigate genome-wide miRNA expression profiles in NKTL.
- To elucidate the pathogenetic role of miRNA deregulation in NKTL development.
Main Methods:
- Genome-wide miRNA expression profiling of formalin-fixed paraffin-embedded NKTL tissues (n=30) and NK cell lines (n=6).
- Comparison with normal NK cells.
- Functional validation of down-regulated miRNAs via re-expression assays.
- Immunohistochemical validation of predicted target proteins.
Main Results:
- NKTL samples predominantly showed down-regulated miRNAs compared to normal NK cells.
- Re-expression of specific miRNAs (e.g., miR-101, miR-26a/b) inhibited NK cell line growth and modulated target gene expression.
- Predicted miRNA targets were enriched in cell cycle, p53, and MAPK signaling pathways.
- Overexpression of MUM1, BLIMP1, and STMN1, with increased MYC expression, was observed in NKTL.
Conclusions:
- miRNA deregulation, particularly down-regulation, plays a significant role in NKTL oncogenesis.
- Restoring specific miRNAs holds therapeutic potential for NKTL.
- MYC activation may contribute to miRNA suppression in NKTL, impacting key regulatory pathways.
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