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Related Concept Videos

Retroviruses02:33

Retroviruses

Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
Multi-species Conserved Sequences02:51

Multi-species Conserved Sequences

Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale  studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved DNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

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RNA viruses are categorized into positive-strand, negative-strand, or double-stranded groups based on their genomic structure and replication mechanisms. This classification dictates how they exploit host cellular machinery for protein synthesis and replication. Some RNA viruses also utilize reverse transcription as part of their life cycle, further diversifying their replication strategies.Positive-Strand RNA VirusesPositive-strand RNA viruses have genomes that function directly as messenger...

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MicroRNA-based Regulation of Picornavirus Tropism
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Published on: February 6, 2017

Vertebrate virus-encoded microRNAs and their sequence conservation.

Kahori Takane1, Akio Kanai

  • 1Institute for Advanced Biosciences, Keio University, Tsuruoka 997-0017, Japan.

Japanese Journal of Infectious Diseases
|September 23, 2011
PubMed
Summary

Conserved viral microRNAs (miRNAs) play crucial roles in regulating host and viral genes. Focusing on conserved viral miRNAs and utilizing evolutionary information aids in accurately identifying their target genes.

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Area of Science:

  • Virology
  • Molecular Biology
  • Genetics

Background:

  • Over 400 microRNAs (miRNAs) encoded by vertebrate viruses regulate host and viral gene expression.
  • Identifying miRNA targets is key to understanding their functions.

Purpose of the Study:

  • To review nucleotide sequence conservation among viral miRNAs.
  • To summarize RNAs targeted by viral miRNAs.
  • To highlight the utility of evolutionary information in identifying viral miRNA-target gene pairs.

Main Methods:

  • Analysis of nucleotide sequence conservation across viral miRNAs.
  • Review of experimental and computational studies identifying viral miRNA targets.
  • Integration of evolutionary information for reliable target gene prediction.

Main Results:

  • Viral miRNA sequences show limited similarity across species, but conserved miRNAs are significant.
  • Evolutionary information enhances the accuracy of identifying viral miRNA-target gene interactions.
  • Recent advances in understanding viral miRNA conservation and targets are discussed.

Conclusions:

  • Conserved viral miRNAs are critical regulators of gene expression.
  • Evolutionary analysis is a powerful tool for discovering functional viral miRNA-target relationships.
  • Further research into viral miRNA conservation will illuminate host-pathogen interactions.