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A fluorometric assay for HIV-protease activity using high-performance liquid chromatography.

P P Tamburini1, R N Dreyer, J Hansen

  • 1Molecular Therapeutics, Inc., West Haven, Connecticut 06516.

Analytical Biochemistry
|May 1, 1990
PubMed
Summary

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A new fluorescence-based assay accurately quantifies HIV-protease activity using HPLC. This rapid and reproducible method enables sensitive detection of enzyme activity for HIV research.

Area of Science:

  • Biochemistry
  • Enzymology
  • Analytical Chemistry

Background:

  • Quantifying in vitro HIV-protease activity is crucial for drug development and understanding viral replication.
  • Existing methods may lack the sensitivity, speed, or reproducibility required for high-throughput screening or detailed kinetic studies.

Purpose of the Study:

  • To develop and validate a rapid, sensitive, and reproducible method for quantifying in vitro HIV-protease activity.
  • To utilize fluorescence detection coupled with High-Performance Liquid Chromatography (HPLC) for precise enzyme activity measurement.

Main Methods:

  • Developed a method based on the endoproteolytic conversion of N-dansyl-SQ-NYPIV (substrate) to N-dansyl-SQNY (product).
  • Employed N-dansyl group as a fluorescence label, assessing its minimal impact on kinetic parameters.

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  • Utilized a single, rapid (3-minute) isocratic reverse-phase HPLC separation with fluorescence detection.
  • Main Results:

    • Achieved sensitive detection of as low as 0.2 pmol of product.
    • Demonstrated high reproducibility of the assay.
    • Confirmed that the N-dansyl label did not significantly alter peptide-enzyme kinetic parameters.

    Conclusions:

    • The developed HPLC-based fluorescence assay provides a rapid and sensitive method for quantifying in vitro HIV-protease activity.
    • The assay is highly reproducible and suitable for analyzing large sample numbers and conducting rigorous enzymological studies.
    • This method offers a valuable tool for HIV research, including drug discovery and mechanistic studies.