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Iquitos virus: a novel reassortant Orthobunyavirus associated with human illness in Peru
Patricia V Aguilar1, Alan D Barrett, Mohammad F Saeed
1U.S. Naval Medical Research Unit Six, Lima, Peru. pvaguila@utmb.edu
Abstract:
Oropouche (ORO) virus, a member of the Simbu serogroup, is one of the few human pathogens in the Orthobunyavirus genus in the family Bunyaviridae. Genetic analyses of ORO-like strains from Iquitos, Peru, identified a novel reassortant containing the S and L segments of ORO virus and the M segment of a novel Simbu serogroup virus. This new pathogen, which we named Iquitos (IQT) virus, was first isolated during 1999 from a febrile patient in Iquitos, an Amazonian city in Peru. Subsequently, the virus was identified as the cause of outbreaks of "Oropouche fever" during 2005 and 2006 in Iquitos. In addition to the identification of 17 isolates of IQT virus between 1999 and 2006, surveys for neutralizing antibody among Iquitos residents revealed prevalence rates of 14.9% for ORO virus and 15.4% for IQT virus. Limited studies indicate that prior infection with ORO virus does not seem to protect against disease caused with the IQT virus infection. Identification of a new Orthobunyavirus human pathogen in the Amazon region of Peru highlights the need for strengthening surveillance activities and laboratory capabilities, and investigating the emergence of new pathogens in tropical regions of South America.
Insights
A novel reassortant virus, Iquitos (IQT) virus, emerged in Peru, causing outbreaks of Oropouche fever. Genetic analysis revealed it contains ORO virus segments and a new Simbu virus segment, highlighting the need for enhanced pathogen surveillance.
Area of Science:
- Virology
- Infectious Diseases
- Epidemiology
Background:
- Oropouche (ORO) virus is a significant human pathogen within the Simbu serogroup of Orthobunyaviruses.
- The Amazon region is a hotspot for emerging infectious diseases, necessitating continuous monitoring.
Purpose of the Study:
- To characterize a novel reassortant virus identified in Iquitos, Peru.
- To investigate the etiological agent responsible for Oropouche fever outbreaks in the region.
Main Methods:
- Genetic analysis of ORO-like virus strains.
- Virus isolation and identification from patient samples.
- Serological surveys to determine antibody prevalence.
Main Results:
- A novel reassortant virus, named Iquitos (IQT) virus, was identified, possessing S and L segments from ORO virus and an M segment from a new Simbu virus.
- IQT virus was isolated from patients and linked to Oropouche fever outbreaks in 2005 and 2006.
- Antibody prevalence indicated significant circulation of both ORO virus (14.9%) and IQT virus (15.4%) in Iquitos residents.
- Cross-protection studies suggest prior ORO virus infection does not confer immunity against IQT virus disease.
Conclusions:
- The emergence of IQT virus, a novel Orthobunyavirus, in Peru underscores the dynamic nature of viral evolution in tropical regions.
- Enhanced surveillance and laboratory capacity are crucial for detecting and responding to new viral threats in South America.
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