Related Experiment Video
Updated: May 28, 2026

Adapting Gastrointestinal Organoids for Pathogen Infection and Single Cell Sequencing under Biosafety Level 3 (BSL-3) Conditions
Published on: September 10, 2021
Adenoviruses in lymphocytes of the human gastro-intestinal tract
Soumitra Roy1, Roberto Calcedo, Angelica Medina-Jaszek
1Gene Therapy Program, Department of Pathology and Laboratory Medicine, Division of Transfusion Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Objective:
Persistent adenoviral shedding in stools is known to occur past convalescence following acute adenoviral infections. We wished to establish the frequency with which adenoviruses may colonize the gut in normal human subjects.
Methods:
The presence of adenoviral DNA in intestinal specimens obtained at surgery or autopsy was tested using a nested PCR method. The amplified adenoviral DNA sequences were compared to each other and to known adenoviral species. Lamina propria lymphocytes (LPLs) were isolated from the specimens and the adenoviral copy numbers in the CD4+ and CD8+ fractions were determined by quantitative PCR. Adenoviral gene expression was tested by amplification of adenoviral mRNA.
Results:
Intestinal tissue from 21 of 58 donors and LPLs from 21 of 24 donors were positive for the presence of adenoviral DNA. The majority of the sequences could be assigned to adenoviral species E, although species B and C sequences were also common. Multiple sequences were often present in the same sample. Forty-one non-identical sequences were identified from 39 different tissue donors. Quantitative PCR for adenoviral DNA in CD4+ and CD8+ fractions of LPLs showed adenoviral DNA to be present in both cell types and ranged from a few hundred to several million copies per million cells on average. Active adenoviral gene expression as evidenced by the presence of adenoviral messenger RNA in intestinal lymphocytes was demonstrated in 9 of the 11 donors tested.
Conclusion:
Adenoviral DNA is highly prevalent in lymphocytes from the gastro-intestinal tract indicating that adenoviruses may be part of the normal gut flora.
Insights
Adenoviruses are frequently found in the gut's lymphocytes, suggesting they are a normal part of the human gut flora. This study detected adenoviral DNA in intestinal tissues and lymphocytes of numerous healthy individuals.
Area of Science:
- Gastroenterology
- Virology
- Immunology
Background:
- Persistent adenoviral shedding occurs post-infection.
- The prevalence of adenoviruses in the normal gut flora is not well-established.
Purpose of the Study:
- To determine the frequency of adenovirus colonization in the human gut.
- To investigate the presence and characteristics of adenoviral DNA in intestinal tissues and lymphocytes.
Main Methods:
- Nested and quantitative PCR were used to detect adenoviral DNA in intestinal tissue and lamina propria lymphocytes (LPLs).
- Adenoviral sequences were identified and compared to known species.
- Adenoviral gene expression was assessed via mRNA amplification in LPLs.
Main Results:
- Adenoviral DNA was detected in intestinal tissue from 21/58 donors and LPLs from 21/24 donors.
- Adenovirus species E, B, and C were identified, with multiple sequences often present.
- Adenoviral DNA was found in CD4+ and CD8+ LPLs, with copy numbers ranging from hundreds to millions.
- Active adenoviral gene expression was confirmed in 9/11 donors.
Conclusions:
- Adenoviral DNA is highly prevalent in gastro-intestinal lymphocytes.
- These findings indicate that adenoviruses may be a component of the normal human gut flora.
Related Concept Videos
Poliomyelitis
Cytomegalovirus Disease
Immune Response Against Viral Pathogens
NK Cells
NK cells are a crucial part of our innate immune system, acting as the first line of defense against viral infections. These cells can recognize and kill infected cells without prior exposure to the virus, effectively slowing down the spread of infection. Additionally, NK cells produce proinflammatory...
Bacteriophages of the Human Virome
Bacterial Gastroenteritis
Lymphoid Cells and Tissues
Lymphoid cells consist of various types of immune system cells. These include B and T lymphocytes, which are responsible for producing antibodies and killing infected cells, respectively. Dendritic cells act as messengers between the innate and adaptive...

