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Sample Preparation to Bioinformatics Analysis of DNA Methylation: Association Strategy for Obesity and Related Trait Studies
Published on: May 6, 2022
Birthweight, maternal weight trajectories and global DNA methylation of LINE-1 repetitive elements
Karin B Michels1, Holly R Harris, Ludovic Barault
1Obstetrics and Gynecology Epidemiology Center, Department of Obstetrics, Gynecology and Reproductive Biology, Brigham and Women's Hospital, Harvard Medical School, Boston, Massachusetts, United States of America. kmichels@rics.bwh.harvard.edu
Insights
Birth weight and prematurity impact long-term health risks. Lower LINE-1 DNA methylation in newborns with low/high birth weight and premature infants suggests potential links to chronic disease susceptibility.
Area of Science:
- Epigenetics
- Perinatal Epidemiology
- Chronic Disease Risk
Background:
- Birth weight and prematurity are associated with increased risks of chronic diseases later in life.
- Global DNA methylation, particularly LINE-1 methylation, is an indicator of chronic disease susceptibility.
Purpose of the Study:
- To investigate the association between fetal and maternal weight trajectories and LINE-1 methylation in a mother-child cohort.
- To explore potential epigenetic markers related to birth outcomes and future health risks.
Main Methods:
- Analysis of LINE-1 methylation in cord blood from 319 mother-child dyads.
- Statistical adjustments for gestational age, infant sex, maternal age, and smoking.
- Exploration of associations with maternal pre-pregnancy BMI and gestational weight gain.
Main Results:
- Significantly lower LINE-1 methylation in cord blood of low and high birthweight infants compared to normal weight infants.
- Significantly lower LINE-1 methylation in cord blood of prematurely born infants compared to term infants.
- No significant associations found between maternal BMI/weight gain and global methylation levels.
Conclusions:
- Cord blood LINE-1 methylation differs significantly between newborns with abnormal birth weights (low/high) and premature infants.
- These methylation differences may contribute to the increased chronic disease risk observed in these populations.
- Further research is needed to understand the functional implications of these epigenetic changes.
Abstract:
Low birthweight, premature birth, intrauterine growth retardation, and maternal malnutrition have been related to an increased risk of cardiovascular disease, type 2 diabetes mellitus, obesity, and neuropsychiatric disorders later in life. Conversely, high birthweight has been linked to future risk of cancer. Global DNA methylation estimated by the methylation of repetitive sequences in the genome is an indicator of susceptibility to chronic diseases. We used data and biospecimens from an epigenetic birth cohort to explore the association between trajectories of fetal and maternal weight and LINE-1 methylation in 319 mother-child dyads. Newborns with low or high birthweight had significantly lower LINE-1 methylation levels in their cord blood compared to normal weight infants after adjusting for gestational age, sex of the child, maternal age at delivery, and maternal smoking during pregnancy (p = 0.007 and p = 0.036, respectively), but the magnitude of the difference was small. Infants born prematurely also had lower LINE-1 methylation levels in cord blood compared to term infants, and this difference, though small, was statistically significant (p = 0.004). We did not find important associations between maternal prepregnancy BMI or gestational weight gain and global methylation of the cord blood or fetal placental tissue. In conclusion, we found significant differences in cord blood LINE-1 methylation among newborns with low and high birthweight as well as among prematurely born infants. Future studies may elucidate whether chromosomal instabilities or other functional consequences of these changes contribute to the increased risk of chronic diseases among individuals with these characteristics.
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