miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT

Marc R Fabian1, Maja K Cieplak, Filipp Frank

  • 1Department of Biochemistry, McGill University, Montreal, Canada.

Insights

This study reveals how GW182 proteins, key in gene silencing, recruit deadenylase complexes like CCR4-NOT. This interaction is crucial for removing the poly(A) tail and repressing target messenger RNAs.

Area of Science:

  • Molecular Biology
  • Gene Regulation
  • RNA Biology

Background:

  • MicroRNAs (miRNAs) regulate gene expression through the miRNA-induced silencing complex (miRISC).
  • GW182 proteins are core components of miRISC, mediating translational repression and mRNA deadenylation.
  • The precise molecular mechanisms underlying GW182-mediated gene silencing remain largely unknown.

Purpose of the Study:

  • To elucidate the molecular mechanisms by which GW182 proteins mediate mRNA deadenylation.
  • To identify the protein complexes that interact with GW182 to facilitate gene silencing.

Main Methods:

  • Investigated interactions between human GW182 and key deadenylase complexes.
  • Identified and characterized novel conserved motifs within GW182 responsible for CCR4-NOT complex binding.

Main Results:

  • Demonstrated that human GW182 independently interacts with both PAN2-PAN3 and CCR4-NOT deadenylase complexes.
  • Discovered two new phylogenetically conserved motifs in GW182 that mediate CCR4-NOT interaction.
  • Showed that while both motifs bind CCR4-NOT, only one promotes efficient mRNA deadenylation.

Conclusions:

  • GW182 acts as a crucial scaffold, recruiting deadenylase complexes to target mRNAs.
  • GW182 functions as a coactivator for the CCR4-NOT complex, enhancing poly(A) tail removal.
  • These findings provide critical insights into the post-transcriptional gene silencing pathway.

Related Concept Videos

Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Nonsense-mediated mRNA Decay02:27

Nonsense-mediated mRNA Decay

The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
RNA Interference01:23

RNA Interference

RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...
MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA ends...