Clinical impact of RT-PCR for pediatric acute respiratory infections: a controlled clinical trial
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Updated: May 28, 2026

Remote Laboratory Management: Respiratory Virus Diagnostics
Published on: April 6, 2019
Jérôme O Wishaupt1, Anne Russcher, Leo C Smeets
1Department of Pediatrics, Reinier de Graaf Hospital, Delft, Netherlands. wishaupt@rdgg.nl
Insights
Real-time polymerase chain reaction (RT-PCR) testing effectively identifies respiratory pathogens in children. However, rapid reporting of RT-PCR results did not significantly impact hospital admissions, length of stay, or antibiotic use.
Area of Science:
- Pediatric infectious diseases
- Clinical microbiology
- Diagnostic testing
Background:
- Real-time polymerase chain reaction (RT-PCR) is a rapid and sensitive diagnostic tool for respiratory pathogens.
- The clinical utility of rapid RT-PCR result reporting in pediatric acute respiratory infections remains to be fully elucidated.
Purpose of the Study:
- To evaluate the diagnostic yield of RT-PCR assays for common respiratory pathogens in children.
- To assess the impact of rapid RT-PCR result communication on patient care, including hospital admissions, length of stay, and antibiotic utilization.
Main Methods:
- A controlled clinical trial was conducted involving pediatric patients (<12 years) with suspected acute respiratory infections.
- Nasal wash specimens were analyzed using RT-PCR for 17 pathogens. Results were reported rapidly (12-36 hours) to the intervention group and delayed (4 weeks) to the control group.
Main Results:
- RT-PCR assays detected at least one pathogen in 82% of specimens, with respiratory syncytial virus being the most common (55%).
- No statistically significant differences were observed between the rapid reporting and control groups regarding hospital admissions, length of hospital stay, or duration of antibiotic use.
Conclusions:
- RT-PCR testing demonstrates a high diagnostic yield for viral respiratory infections in children.
- Rapid communication of RT-PCR results does not appear to influence key clinical management decisions or outcomes in this pediatric population.
Objective:
Real-time polymerase chain reaction (RT-PCR) testing is a quick sensitive method for detecting respiratory pathogens. We evaluated the diagnostic yield of RT-PCR assays and measured the effect of rapid reporting on patient care.
Methods:
In a controlled clinical trial, nasal wash specimens were obtained from patients <12 years of age with suspected acute respiratory infections. In addition to the standard hospital protocol, RT-PCR assays for 17 pathogens were performed. The RT-PCR results were communicated to the clinicians within 12 to 36 hours in the intervention group and after 4 weeks in the control group.
Results:
A total of 583 patients were included (mean age: 8.1 months [range: 0-107.5 months]): 298 in the intervention group and 285 in the control group. Eighty-two percent of nasal wash specimens tested positive for ≥1 pathogen. Respiratory syncytial virus was the most frequently encountered (55%) pathogen. There were no significant differences between the groups with respect to hospital admissions (intervention group: 223 admissions; control group: 211 admissions; P = .825), length of hospital stay (mean ± SD: 3.68 ± 2.68 days [intervention group] and 3.96 ± 2.67 days [control group]; P = .178), or duration of antibiotic use (mean ± SD: 6.52 ± 2.15 days [intervention group] and 6.97 ± 2.86 days [control group]; P = .490), when antibiotic treatment had been initiated.
Conclusions:
RT-PCR testing has a high yield of viral diagnoses, but rapid communication does not lead to decreases in hospital admissions, shorter hospital stays, or less antibiotic use for children with acute respiratory infections.
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