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Updated: May 28, 2026

Heterokaryon Technique for Analysis of Cell Type-specific Localization
Published on: March 11, 2011
Analysis of nucleo-cytoplasmic shuttling of the proto-oncogene SET/I2PP2A
B Daniel Lam1, Eloise C Anthony, Peter L Hordijk
1Department of Molecular Cell Biology, Sanquin Research and Landsteiner Laboratory, Academic Medical Center, University of Amsterdam, Amsterdam, The Netherlands.
Abstract:
SET/I2PP2A is a nuclear protein that was initially identified as an oncogene in human undifferentiated acute myeloid leukemia, fused to the nuclear porin Nup-214. In addition, SET is a potent inhibitior of the phosphatase PP2A. Previously, we proposed a model in which the small GTPase Rac1 recruits SET from the nucleus to the plasma membrane to promote cell migration. This event represents an entirely novel concept in the field of cell migration. Now, fluorescent versions of the SET protein are generated to analyze its nucleo-cytoplasmic shuttling in live cells. Our studies showed that under steady-state conditions a fraction of the SET protein, which is primarily localized in the nucleus, translocates to the cytosol in an apparently random fashion. SET exiting the nucleus was also seen in spreading as well as dividing cells. We designed an image analysis method to quantify the frequency of nuclear exit of the SET proteins, based on 4D confocal imaging. This straightforward method was validated by analysis of SET wild-type and mutant proteins. This showed that the frequency of nuclear exit of a Ser-9 phosphomimetic mutant (S9E) is enhanced compared to wild-type SET or a S9A mutant. Thus, we have developed a novel method to analyze the nucleo-cytoplasmic shuttling of the proto-oncogene SET dynamics in live cells. This method will also be applicable to monitor dynamic localization of other nuclear and/or cytoplasmic signaling proteins.
Insights
Researchers developed a new method to track the SET protein
Area of Science:
- Cell Biology
- Molecular Biology
- Oncology
Background:
- SET/I2PP2A is a nuclear proto-oncogene implicated in acute myeloid leukemia.
- SET inhibits the phosphatase PP2A and may regulate cell migration.
- Rac1 GTPase was previously proposed to recruit SET from the nucleus to the plasma membrane.
Purpose of the Study:
- To develop and validate a method for analyzing nucleo-cytoplasmic shuttling of the SET protein in live cells.
- To investigate the dynamics of SET protein localization under various cellular conditions.
- To assess the impact of SET protein phosphorylation on its nuclear export.
Main Methods:
- Generation of fluorescent SET protein variants for live-cell imaging.
- Utilizing 4D confocal microscopy to capture dynamic protein localization.
- Development of an image analysis technique to quantify nuclear exit frequency.
- Analysis of wild-type SET and phosphomimetic/mutant variants (S9E, S9A).
Main Results:
- SET protein exhibits nucleo-cytoplasmic shuttling, with a fraction translocating to the cytosol.
- Nuclear exit of SET was observed in spreading and dividing cells.
- The frequency of nuclear exit was enhanced in the Ser-9 phosphomimetic mutant (S9E).
- The developed image analysis method successfully quantified SET nuclear export dynamics.
Conclusions:
- A novel method for analyzing SET protein nucleo-cytoplasmic shuttling in live cells has been established.
- SET protein dynamics are influenced by phosphorylation at Ser-9.
- This method is applicable for studying the dynamic localization of other signaling proteins.
- Understanding SET shuttling may provide insights into its role in cancer and cell migration.
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