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Updated: Jan 18, 2026

Isolation of Culturable Yeasts and Molds from Soils to Investigate Fungal Population Structure
Published on: May 27, 2022
[Identification of soil-borne fungi using Fourier transform infrared spectroscopy]
A-Li Chai1, Bao-Ju Li, Yan-Xia Shi
1Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Beijing 100081, China. chaiali@163.com
Abstract:
Fourier transform infrared (FTIR) attenuated total reflectance (ATR) spectroscopy was used in combination with multivariate statistic analysis for identification of soil-borne fungi that causes severe economic damage to agriculture: Fusarium monili forme, Fusarium semitectum, Fusarium oxysporum, Fusarium solani, Rhizoctonia solani, Sclerotinia sclerotiorum, Pythium aphanidermatum and Phytophthora capsici. The original FTIR spectra were normalized, and the second derivatives were calculated, from which the peak wave numbers showing greatest variability were selected: 2924, 2854, 1745, 1641, 1547, 1466, 1406, 1376, 1306, 1240, 1201, 1152, 1109 and 1028 cm(-1). To discriminate different fungal strains, canonical discriminant analysis and cluster analysis were performed at these characteristic wave numbers. Results showed that the classification accuracies achieved 100% for different species of fungi, and classification accuracies for different fusarium strains achieved 95.56%, demonstrating the high potential of this technique for fungi identification.
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