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A Combinatorial Single-cell Approach to Characterize the Molecular and Immunophenotypic Heterogeneity of Human Stem and Progenitor Populations
Published on: October 25, 2018
Drug targets: single-cell transcriptomics hastens unbiased discovery
Tamas Bartfai1, Peter T Buckley, James Eberwine
1Molecular and Integrative Neurosciences Department, The Scripps Research Institute, 10 550N. Torrey Pines Road, SR307, La Jolla, CA, 92037, USA. tbartfai@scripps.edu
Trends in Pharmacological Sciences
|October 29, 2011
Summary
Sequencing based single-cell transcriptomics (SBSCT) identifies numerous neuronal receptors and channels, overcoming limitations of pooled cell methods. This technique is crucial for discovering novel neuropharmacology drug targets.
Area of Science:
- Neuroscience
- Pharmacology
- Genomics
- Molecular Biology
Background:
- Drug discovery in neuro- and psychopharmacology faces challenges due to a limited number of identified drug targets.
- Existing methods may fail to detect low-abundance targets like specific receptors and channels in neurons.
- The scarcity of validated drug targets hinders the development of new therapeutics for neurological and psychiatric disorders.
Purpose of the Study:
- To highlight the potential of Next-Generation sequencing based single-cell transcriptomics (SBSCT) for identifying novel drug targets.
- To demonstrate SBSCT's capability in revealing the complete receptor repertoire of individual neurons.
- To advocate for SBSCT as a superior method for drug target discovery compared to other single-cell profiling techniques.
Main Methods:
- Utilized sequencing based single-cell transcriptomics (SBSCT) to analyze individual neurons.
- Identified hundreds of different receptors and channels within single neurons.
- Compared the efficacy of SBSCT with other single-cell profiling methods for target identification.
Main Results:
- SBSCT successfully identified a wide array of receptors and channels in individual neurons.
- The method accurately detected low-abundance mRNAs encoding receptors, avoiding signal dilution issues common in pooled-cell analyses.
- SBSCT demonstrated potential for identifying orphan receptors and providing evidence for receptor heterodimers.
Conclusions:
- SBSCT is a powerful and unbiased tool for discovering novel drug targets in neuro- and psychopharmacology.
- The technique enables the identification of previously overlooked receptors on key neurons that may have therapeutic value.
- SBSCT offers a significant advancement for identifying targets crucial for developing new neurological and psychiatric medications.

