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Published on: December 23, 2020
The SARS-coronavirus-host interactome: identification of cyclophilins as target for pan-coronavirus inhibitors
Susanne Pfefferle1, Julia Schöpf, Manfred Kögl
1Bernhard-Nocht-Institute, Hamburg, Germany.
Abstract:
Coronaviruses (CoVs) are important human and animal pathogens that induce fatal respiratory, gastrointestinal and neurological disease. The outbreak of the severe acute respiratory syndrome (SARS) in 2002/2003 has demonstrated human vulnerability to (Coronavirus) CoV epidemics. Neither vaccines nor therapeutics are available against human and animal CoVs. Knowledge of host cell proteins that take part in pivotal virus-host interactions could define broad-spectrum antiviral targets. In this study, we used a systems biology approach employing a genome-wide yeast-two hybrid interaction screen to identify immunopilins (PPIA, PPIB, PPIH, PPIG, FKBP1A, FKBP1B) as interaction partners of the CoV non-structural protein 1 (Nsp1). These molecules modulate the Calcineurin/NFAT pathway that plays an important role in immune cell activation. Overexpression of NSP1 and infection with live SARS-CoV strongly increased signalling through the Calcineurin/NFAT pathway and enhanced the induction of interleukin 2, compatible with late-stage immunopathogenicity and long-term cytokine dysregulation as observed in severe SARS cases. Conversely, inhibition of cyclophilins by cyclosporine A (CspA) blocked the replication of CoVs of all genera, including SARS-CoV, human CoV-229E and -NL-63, feline CoV, as well as avian infectious bronchitis virus. Non-immunosuppressive derivatives of CspA might serve as broad-range CoV inhibitors applicable against emerging CoVs as well as ubiquitous pathogens of humans and livestock.
Insights
Scientists identified immunophilins as key targets for fighting coronaviruses (CoVs). Inhibiting these proteins with cyclosporine A blocked CoV replication, offering a potential broad-spectrum antiviral strategy against emerging and existing CoV threats.
Area of Science:
- Virology
- Immunology
- Systems Biology
Background:
- Coronaviruses (CoVs) are significant human and animal pathogens causing severe diseases.
- The lack of available vaccines and therapeutics against CoVs highlights the need for novel antiviral strategies.
- Understanding virus-host interactions is crucial for identifying broad-spectrum antiviral targets.
Purpose of the Study:
- To identify host cell proteins interacting with CoV non-structural protein 1 (Nsp1) using a systems biology approach.
- To investigate the role of identified interaction partners in CoV replication and pathogenesis.
- To evaluate the potential of targeting these interactions for broad-spectrum antiviral therapy.
Main Methods:
- Genome-wide yeast-two hybrid interaction screening to identify CoV Nsp1 binding partners.
- Analysis of the Calcineurin/NFAT pathway modulation by identified host factors.
- Infection studies with various CoV genera to assess the antiviral efficacy of cyclosporine A (CspA).
Main Results:
- Immunophilins (PPIA, PPIB, PPIH, PPIG, FKBP1A, FKBP1B) were identified as Nsp1 interaction partners.
- Nsp1 and SARS-CoV infection enhanced Calcineurin/NFAT pathway signaling and interleukin 2 induction.
- Cyclosporine A (CspA) effectively blocked the replication of multiple CoV genera, including SARS-CoV, HCoV-229E, HCoV-NL-63, Feline CoV, and Avian IBV.
Conclusions:
- Immunophilins are critical host factors involved in CoV replication and pathogenesis.
- Inhibition of cyclophilins by CspA demonstrates broad-spectrum antiviral activity against diverse CoVs.
- Non-immunosuppressive CspA derivatives represent promising candidates for broad-range CoV inhibitors against emerging and existing threats.
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