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Updated: May 27, 2026

Immunohistochemical Detection of 5-Methylcytosine and 5-Hydroxymethylcytosine in Developing and Postmitotic Mouse Retina
Published on: August 29, 2018
MicroRNA regulation via DNA methylation during the morula to blastocyst transition in mice
Yee-Ming Lee1, Huei-Wen Chen, Pawan Kumar Maurya
1Institute of Pharmacology, College of Medicine, National Yang-Ming University, Taipei, Taiwan.
Abstract:
Epigenetic regulation is responsible for transcriptional silencing of genes and parental imprinting. This study addresses the question whether microRNAs (miRNAs) could be affected by DNA methylation during morula-blastocyst transition. Mouse embryos were treated with/without a DNA methyltransferase inhibitor (5-aza-2'-deoxycytidine, 5-aza-dC, 10 nM-5 μM). Changes of miRNAs were analyzed by quantitative real-time (Q-PCR)-based megaplex pre-amp microRNA assays. Development from morula to blastocyst in mice was inhibited by 5-aza-dC in a dose-dependent manner (10 nM-5 μM), with half of the embryos arrested at morula stage when treated with levels of 5-aza-dC as low as 50 nM. In total, 48 down-regulated microRNAs and 17 up-regulated microRNAs (≥5-fold changes) were identified after 5-aza-dC treatment, including let-7e, mir-20a, mir-21, mir-34b, mir-128b and mir-452. Their predicted targets were selected based on software analysis, published databases and further confirmed by Q-PCR. At least eight targets, including dnmt3a, jagged 1, sp1, edg2, abcg4, numa1, tmsb10 and csf1r were confirmed. In conclusion, 5-aza-dC-modified microRNA profiles and identification of the microRNA's targets during the morula to blastocyst stage in mice provide information that helps us to explore the relationship between fertility, microRNA regulation and epigenetic intervention.
Insights
DNA methylation changes affect microRNA profiles during early mouse embryo development. Inhibiting DNA methylation disrupted embryo development and altered microRNA expression, impacting gene targets crucial for development.
Area of Science:
- Developmental Biology
- Epigenetics
- Molecular Biology
Background:
- Epigenetic regulation, including DNA methylation, plays a critical role in gene silencing and parental imprinting.
- MicroRNAs (miRNAs) are key regulators of gene expression, influencing various biological processes.
Purpose of the Study:
- To investigate the impact of DNA methylation on microRNA expression during the morula-blastocyst transition in mouse embryos.
- To explore the relationship between epigenetic intervention, microRNA regulation, and fertility.
Main Methods:
- Mouse embryos were treated with 5-aza-2'-deoxycytidine (5-aza-dC), a DNA methyltransferase inhibitor, at varying concentrations.
- MicroRNA expression changes were quantified using quantitative real-time (Q-PCR)-based megaplex pre-amp microRNA assays.
- Predicted microRNA targets were identified using bioinformatics tools and confirmed via Q-PCR.
Main Results:
- 5-aza-dC treatment inhibited mouse embryo development from morula to blastocyst in a dose-dependent manner, with significant arrest at 50 nM.
- A total of 48 down-regulated and 17 up-regulated microRNAs (≥5-fold change) were identified following 5-aza-dC treatment.
- Eight key targets, including dnmt3a and jagged 1, were confirmed for the affected microRNAs.
Conclusions:
- DNA methylation status significantly influences microRNA profiles during the critical morula to blastocyst developmental stage.
- Altered microRNA expression and identified targets provide insights into the mechanisms linking epigenetic regulation, fertility, and potential interventions.
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