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Related Concept Videos

DNA Microarrays02:34

DNA Microarrays

Microarrays are high-throughput and relatively inexpensive assays that can be automated to analyze large quantities of data at a time. They are used in genome-wide studies to compare gene or protein expression under two varied conditions, such as healthy and diseased states. Microarrays consist of glass or silica slides on which probe molecules are covalently attached through surface functionalization. Most commonly, the slides are prepared through the chemisorption of silanes to silica...
DNA Agarose Gel Electrophoresis02:35

DNA Agarose Gel Electrophoresis

Agarose gel electrophoresis is a laboratory technique commonly used to separate DNA fragments by size. However, it can also be used to isolate and purify DNA fragments using a gel extraction protocol.
Gel extraction follows five major steps: running gel electrophoresis to separate fragments, isolating the individual bands, extracting DNA from those bands, and removing the dye and salts from the extracted mixture to obtain pure DNA.
In cloning experiments, both the insert and vector DNA...

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Chemically-blocked Antibody Microarray for Multiplexed High-throughput Profiling of Specific Protein Glycosylation in Complex Samples
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Glycoarray by DNA-directed immobilization.

François Morvan1, Yann Chevolot, Jing Zhang

  • 1Institut des Biomoléules Max Mousseron, UMR 5247, CNRS Université Montpellier 1, Université Montpellier 2, Montpellier, France.

Methods in Molecular Biology (Clifton, N.J.)
|November 8, 2011
PubMed
Summary

This study presents a new method for creating carbohydrate microarrays using oligonucleotide glycomimetic conjugates and DNA-directed immobilization (DDI). This efficient technique enables precise carbohydrate placement on surfaces for biological interaction studies.

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Area of Science:

  • Carbohydrate chemistry
  • Bioconjugation
  • Microarray technology

Background:

  • Glycoarrays are essential tools for studying carbohydrate-mediated biological events.
  • Effective immobilization of carbohydrates is crucial for glycoarray fabrication.
  • Existing immobilization strategies have limitations in efficiency and selectivity.

Purpose of the Study:

  • To develop a protocol for synthesizing oligonucleotide glycomimetic conjugates.
  • To establish a method for immobilizing these conjugates onto DNA microarrays using DNA-directed immobilization (DDI).
  • To enable the creation of precisely patterned carbohydrate microarrays.

Main Methods:

  • Synthesis of fluorescent oligonucleotide trigalactosylmimetic conjugates.
  • Utilizing DNA-directed immobilization (DDI) for site-selective attachment.
  • Fabrication of carbohydrate microarrays on glass slides.

Main Results:

  • Successful synthesis of oligonucleotide glycomimetic conjugates.
  • Demonstration of efficient and site-selective immobilization via DDI.
  • Generation of functional carbohydrate microarrays with precise patterning.

Conclusions:

  • The proposed protocol offers a robust method for preparing oligonucleotide glycomimetic conjugates.
  • DDI provides an efficient and selective approach for carbohydrate microarray fabrication.
  • This technique facilitates advanced studies of carbohydrate-protein interactions.