Related Experiment Video
Updated: May 27, 2026

A Computational Pipeline for Intergenic/Intragenic Enhancer RNA Quantification in Mouse Embryonic Stem Cells
Published on: October 28, 2025
NARWHAL, a primary analysis pipeline for NGS data
R W W Brouwer1, M C G N van den Hout, F G Grosveld
1Center for Biomics, Department of Cell Biology, Erasmus Medical Center, Rotterdam, The Netherlands.
Unlabelled:
The NARWHAL software pipeline has been developed to automate the primary analysis of Illumina sequencing data. This pipeline combines a new and flexible de-multiplexing tool with open-source aligners and automated quality assessment. The entire pipeline can be run using only one simple sample-sheet for diverse sequencing applications. NARWHAL creates a sample-oriented data structure and outperforms existing tools in speed.
Availability:
https://trac.nbic.nl/narwhal/.

