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Related Concept Videos

Plant Tissues01:18

Plant Tissues

Plants are multicellular eukaryotes with tissue systems made of various cell types that carry out specific functions. Different tissues work together to perform a unique function and form an organ. Organs working together form organ systems. Vascular plants have two distinct organ systems: a shoot system and a root system. The shoot system consists of two portions: the vegetative (non-reproductive) parts of the plant, such as the leaves and the stems, and the reproductive parts of the plant,...
Morphogenesis02:19

Morphogenesis

Plant morphogenesis—the development of a plant’s form and structure—involves several overlapping developmental processes, including growth and cell differentiation. Precursor cells differentiate into specific cell types, which are organized into the tissues and organ systems that make up the functional plant.
Mechanistic Models: Overview of Compartment Models01:21

Mechanistic Models: Overview of Compartment Models

Mechanistic models, a category encompassing both physiological and compartmental modeling, differ from empirical models' approaches to incorporating known factors about the systems being modeled. Empirical models describe data with minimal assumptions, while mechanistic models aim to provide a robust description of available data by specifying assumptions and integrating known factors about the system. Compartmental analysis is a key example of a mechanistic model in pharmacokinetics and...
Pharmacokinetic Models: Overview01:20

Pharmacokinetic Models: Overview

Pharmacokinetic models utilize mathematical analysis to achieve a detailed quantitative understanding of a drug's life cycle within the body. They are instrumental in simulating a drug's pharmacokinetic parameters, predicting drug concentrations over time, optimizing dosage regimens, linking concentrations with pharmacologic activity, and estimating potential toxicity.
There are three primary types of models: empirical, compartment, and physiological. Empirical models, with minimal assumptions,...
Pharmacokinetic Models: Comparison and Selection Criterion01:26

Pharmacokinetic Models: Comparison and Selection Criterion

Physiological and compartmental models are valuable tools used in studying biological systems. These models rely on differential equations to maintain mass balance within the system, ensuring an accurate representation of the dynamic processes at play.
Physiological models take a detailed approach by considering specific molecular processes. They can predict drug distribution, metabolism, and elimination changes, providing a comprehensive understanding of how drugs interact with the body.
The Phragmoplast01:59

The Phragmoplast

Cell division is essential for organismal growth and development. In animal cells, the central spindle and its associated proteins form the midbody, a structure that has an essential role in cytokinesis. In plants, the central spindle, along with the microtubules, actin, and other cell components, matures into the phragmoplast, which is necessary for cytokinesis. Unlike the stationary midbody, the phragmoplast expands centrifugally, eventually leading to the formation of the new cell wall.
The...

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Related Experiment Video

Updated: May 27, 2026

Annotation of Plant Gene Function via Combined Genomics, Metabolomics and Informatics
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Published on: June 17, 2012

Using functional–structural plant models to study, understand and integrate plant development and ecophysiology.

Theodore M DeJong1, David Da Silva, Jan Vos

  • 1Plant Sciences Department, University of California, Davis, CA, USA. tmdejong@ucdavis.edu

Annals of Botany
|November 16, 2011
PubMed
Summary

Functional–structural plant models (FSPMs) integrate plant structure and processes across scales, from cells to communities. This interdisciplinary field is expanding to address diverse plant types and applications in agronomy.

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Area of Science:

  • Plant Science
  • Computational Biology
  • Ecology

Background:

  • Functional–structural plant models (FSPMs) link plant architecture with physiological and developmental processes.
  • FSPM applications have broadened significantly, encompassing scales from cellular to community levels.
  • Research spans diverse plant types, including algae, crops, and trees.

Discussion:

  • FSPM is a highly interdisciplinary field, integrating expertise from plant physiology, anatomy, morphology, mathematics, computer science, cellular biology, ecology, and agronomy.
  • This special issue showcases comprehensive FSPMs, resource partitioning models, and software for plant and environment simulation.
  • Techniques for data acquisition and processing, alongside agronomic applications, are also featured.

Key Insights:

  • FSPMs enable dynamic simulation of plant growth and development across multiple spatial and temporal scales.
  • The models integrate complex biological processes with structural attributes of plants.
  • Interdisciplinary collaboration is crucial for advancing FSPM research and applications.

Outlook:

  • Future FSPM research will likely focus on refining models for specific plant types and ecological contexts.
  • Advancements in data acquisition and computational power will enhance model accuracy and scope.
  • Applications in precision agriculture and ecological forecasting are expected to grow.