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Related Concept Videos

Cytomegalovirus Disease01:27

Cytomegalovirus Disease

Cytomegalovirus (CMV) disease is caused by human cytomegalovirus, a double-stranded DNA virus of the Herpesviridae family. While primary CMV infection is often asymptomatic in immunocompetent individuals, the virus can cause severe disease in neonates and immunocompromised patients. CMV is the most common cause of congenital viral infection in the United States, and a major pathogen in solid organ and hematopoietic stem cell transplant recipients.CMV is transmitted via bodily fluids, sexual...
Human Virome01:26

Human Virome

The human body harbors a vast and diverse viral community known as the human virome. The virome includes bacteriophages that infect bacteria, and eukaryotic viruses that infect human cells. Transient dietary and environmental viruses also contribute to this dynamic ecosystem. Estimates suggest the human body may contain on the order of 10¹³ viral particles, though abundance varies widely by body site and detection method.Comprehensive characterization of the virome has become possible only with...

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Related Experiment Video

Updated: May 27, 2026

Use of In vivo Imaging to Monitor the Progression of Experimental Mouse Cytomegalovirus Infection in Neonates
05:53

Use of In vivo Imaging to Monitor the Progression of Experimental Mouse Cytomegalovirus Infection in Neonates

Published on: July 6, 2013

High-resolution human cytomegalovirus transcriptome.

Derek Gatherer1, Sepehr Seirafian, Charles Cunningham

  • 1Medical Research Council-University of Glasgow Centre for Virus Research, Glasgow G11 5JR, United Kingdom.

Proceedings of the National Academy of Sciences of the United States of America
|November 24, 2011
PubMed
Summary
This summary is machine-generated.

Deep sequencing reveals human cytomegalovirus (HCMV) transcription complexity, with most RNA producing noncoding transcripts and frequent alternative splicing affecting protein-coding genes. This highlights sophisticated viral functionality.

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Area of Science:

  • Virology
  • Genomics
  • Molecular Biology

Background:

  • Human cytomegalovirus (HCMV) is a significant pathogen with a complex lifecycle.
  • Understanding HCMV gene expression is crucial for developing antiviral strategies.

Purpose of the Study:

  • To comprehensively map the HCMV transcriptome during infectious virion production.
  • To identify novel noncoding RNAs, splice variants, and protein-coding regions.

Main Methods:

  • Deep sequencing of polyadenylated viral RNA.
  • Confirmation of findings using RT-PCR and RACE (Rapid Amplification of cDNA Ends).

Main Results:

  • The majority of HCMV RNA (65.1%) consists of four major noncoding transcripts.
  • Extensive alternative splicing affects 58 protein-coding genes, with frequent splicing in four specific genes.
  • Four previously unrecognized protein-coding regions (RL8A, RL9A, UL150A, US33A) were annotated, with UL150A protein expression confirmed.

Conclusions:

  • HCMV transcription is highly complex and multifaceted, suggesting sophisticated viral functions.
  • Deep sequencing is a powerful tool for elucidating the genomics of nuclear DNA viruses like HCMV.