Related Experiment Video
Updated: May 27, 2026

Estimation of Urinary Nanocrystals in Humans using Calcium Fluorophore Labeling and Nanoparticle Tracking Analysis
Published on: February 9, 2021
Association of vitamin D receptor gene polymorphism and calcium urolithiasis in the Chinese Han population
Shuai Wang1, Xiao Wang, Jian Wu
1Department of Urology, School of Medicine, The First Affiliated Hospital, Zhejiang University, Qingchun Road 79, Hangzhou 310003, Zhejiang Province, China.
Insights
Vitamin D Receptor (VDR) gene variations influence calcium urolithiasis risk and recurrence. Specific VDR polymorphisms like Apa I are linked to increased stone formation and differing presentations in males and females.
Area of Science:
- Genetics
- Urology
- Endocrinology
Background:
- Calcium urolithiasis is a common condition with complex etiology.
- The vitamin D receptor (VDR) plays a crucial role in calcium homeostasis.
- Genetic variations in the VDR gene may influence susceptibility to urolithiasis.
Purpose of the Study:
- To investigate the association between VDR gene polymorphisms and the clinical presentation of calcium urolithiasis.
- To identify specific VDR single nucleotide polymorphisms (SNPs) linked to urolithiasis risk and recurrence.
Main Methods:
- Case-control study involving 464 urolithiasis patients and 450 healthy controls.
- Genotyping of five VDR SNPs (Fok I, Bsm I, Dde I, Apa I, Taq I) using polymerase chain reaction-based restriction analysis.
- Haplotype analysis to assess combined effects of VDR polymorphisms.
Main Results:
- Significant differences in VDR Apa I genotype frequencies were observed between patients and controls (P = 0.006).
- The Apa I 'a' allele was associated with an increased risk of kidney stone recurrence (P = 0.028).
- VDR Fok I, Dde I, and Apa I polymorphisms showed significant gender-specific differences in male and female patients (P < 0.05).
- Haplotype analysis revealed a significant association between combined VDR polymorphisms and urolithiasis (global P = 0.0001).
Conclusions:
- Genetic polymorphisms of the VDR are significantly associated with the clinical presentation of calcium urolithiasis.
- VDR gene variations are important factors in calcium urolithiasis development and progression in the Han population of southern China.
Abstract:
To investigate the effect of the vitamin D receptor (VDR) Fok I Bsm I Dde I Apa I Taq I polymorphism on the clinical presentation of calcium urolithiasis, 464 patients with urolithiasis and 450 age- and sex-matched healthy controls were recruited from The First Affiliated Hospital of Zhejiang University between January 2010 and March 2011. Five SNPs of VDR polymorphism were detected using polymerase chain reaction-based restriction analysis. The frequency of VDR Apa I genotypes between the patients and the healthy controls was significantly different (P = 0.006). Apa I a allele was found to be associated with increased risk of stone recurrence (P = 0.028). We also found Fok I Dde I Apa I showed a significant difference between male and female in the patients group (P < 0.05). Haplotype analysis of the five VDR polymorphisms showed a significant association with urolithiasis (global-P value = 0.0001). Genetic polymorphisms of VDR are important in the clinical presentation of patients with calcium urolithiasis in the Han population of southern China.
Related Concept Videos
Single Nucleotide Polymorphisms-SNPs
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu
Genome-wide Association Studies-GWAS
GWAS does not require the identification of the target gene involved in...
Urinary Tract Calculi I: Introduction
Principles of Pharmacogenetics: Types of Genetic Variants
Urinary Tract Calculi IV: Nutrition Therapy and Prevention