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Updated: May 27, 2026

MicroRNA-based Regulation of Picornavirus Tropism
Published on: February 6, 2017
A viral deubiquitylating enzyme targets viral RNA-dependent RNA polymerase and affects viral infectivity
Mélanie Chenon1, Laurent Camborde, Soizic Cheminant
1Laboratoire de Virologie Moléculaire, CNRS-Univ Paris Diderot, Institut Jacques Monod, Cell Biology Department, UMR 7592, Paris, France.
Abstract:
Selective protein degradation via the ubiquitin-proteasome system (UPS) plays an essential role in many major cellular processes, including host-pathogen interactions. We previously reported that the tightly regulated viral RNA-dependent RNA polymerase (RdRp) of the positive-strand RNA virus Turnip yellow mosaic virus (TYMV) is degraded by the UPS in infected cells, a process that affects viral infectivity. Here, we show that the TYMV 98K replication protein can counteract this degradation process thanks to its proteinase domain. In-vitro assays revealed that the recombinant proteinase domain is a functional ovarian tumour (OTU)-like deubiquitylating enzyme (DUB), as is the 98K produced during viral infection. We also demonstrate that 98K mediates in-vivo deubiquitylation of TYMV RdRp protein--its binding partner within replication complexes--leading to its stabilization. Finally, we show that this DUB activity contributes to viral infectivity in plant cells. The identification of viral RdRp as a specific substrate of the viral DUB enzyme thus reveals the intricate interplay between ubiquitylation, deubiquitylation and the interaction between viral proteins in controlling levels of RdRp and viral infectivity.
Insights
Turnip yellow mosaic virus (TYMV) replication protein 98K uses its deubiquitylating enzyme (DUB) activity to stabilize viral RNA-dependent RNA polymerase (RdRp), enhancing viral infectivity in plant cells.
Area of Science:
- Plant virology
- Molecular biology
- Ubiquitin-proteasome system (UPS)
Background:
- Selective protein degradation via the UPS is crucial for cellular processes, including host-pathogen interactions.
- Turnip yellow mosaic virus (TYMV) RNA-dependent RNA polymerase (RdRp) is degraded by the UPS in infected cells, impacting viral infectivity.
Purpose of the Study:
- To investigate how TYMV counteracts the degradation of its RdRp.
- To characterize the deubiquitylating enzyme (DUB) activity of the TYMV 98K replication protein.
Main Methods:
- In vitro assays using recombinant proteinase domain of TYMV 98K.
- In vivo deubiquitylation assays in plant cells.
- Analysis of viral infectivity.
Main Results:
- The TYMV 98K replication protein possesses a functional ovarian tumour (OTU)-like deubiquitylating enzyme (DUB) domain.
- TYMV 98K mediates in vivo deubiquitylation and stabilization of its binding partner, TYMV RdRp.
- This DUB activity of 98K contributes to viral infectivity in plant cells.
Conclusions:
- Viral DUB activity is essential for stabilizing viral RdRp.
- TYMV 98K directly deubiquitylates and stabilizes viral RdRp, enhancing infectivity.
- This highlights the intricate interplay between ubiquitylation, deubiquitylation, and viral protein interactions in controlling viral replication.
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