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Updated: May 27, 2026

Oxygen-Independent Assays to Measure Mitochondrial Function in Mammals
Published on: May 19, 2023
FOXO3a regulates reactive oxygen metabolism by inhibiting mitochondrial gene expression
E C Ferber1, B Peck, O Delpuech
1Gene Expression Analysis Laboratory, Cancer Research UK London Research Institute, 44 Lincoln's Inn Fields, London WC2A 3LY, UK.
Abstract:
Forkhead transcription factors of the O class (FOXOs) are important targets of the phosphatidylinositol 3-kinase/Akt pathway, and are key regulators of the cell cycle, apoptosis and response to oxidative stress. FOXOs have been shown to have tumour suppressor function and are important for stem cell maintenance. We have performed a detailed analysis of the transcriptional programme induced in response to Forkhead-box protein O3a (FOXO3a) activation. We observed that FOXO3a activation results in the repression of a large number of nuclear-encoded genes with mitochondrial function. Repression of these genes was mediated by FOXO3a-dependent inhibition of c-Myc. FOXO3a activation also caused a reduction in mitochondrial DNA copy number, expression of mitochondrial proteins, respiratory complexes and mitochondrial respiratory activity. FOXO3a has been previously implicated in the detoxification of reactive oxygen species (ROS) through induction of manganese-containing superoxide dismutase (SOD2). We observed that reduction in ROS levels following FOXO3a activation was independent of SOD2, but required c-Myc inhibition. Hypoxia increases ROS production from the mitochondria, which is required for stabilisation of the hypoxia-inducible factor-1α (HIF-1α). FOXO3a activation blocked the hypoxia-dependent increase in ROS and prevented HIF-1α stabilisation. Our data suggest that FOXO factors regulate mitochondrial activity through inhibition of c-Myc function and alter the hypoxia response.
Insights
Forkhead transcription factors (FOXO3a) inhibit mitochondrial gene expression by suppressing c-Myc. This FOXO3a activity reduces mitochondrial function and alters cellular responses to hypoxia.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Forkhead transcription factors of the O class (FOXOs) regulate cell cycle, apoptosis, and oxidative stress response.
- FOXOs function as tumor suppressors and are crucial for stem cell maintenance.
- The phosphatidylinositol 3-kinase/Akt pathway targets FOXOs.
Purpose of the Study:
- To analyze the transcriptional program induced by Forkhead-box protein O3a (FOXO3a) activation.
- To investigate the role of FOXO3a in regulating mitochondrial function and cellular responses to oxidative stress and hypoxia.
Main Methods:
- Analysis of the transcriptional program following FOXO3a activation.
- Assessment of mitochondrial DNA copy number, protein expression, and respiratory activity.
- Evaluation of reactive oxygen species (ROS) levels and hypoxia-inducible factor-1α (HIF-1α) stabilization.
Main Results:
- FOXO3a activation repressed nuclear-encoded genes involved in mitochondrial function, mediated by c-Myc inhibition.
- FOXO3a reduced mitochondrial DNA copy number, mitochondrial protein expression, and respiratory activity.
- FOXO3a activation decreased ROS levels independently of SOD2 but dependent on c-Myc inhibition, and blocked hypoxia-induced HIF-1α stabilization.
Conclusions:
- FOXO factors regulate mitochondrial activity primarily through c-Myc inhibition.
- FOXO3a activation alters cellular responses to hypoxia by modulating ROS production and HIF-1α stabilization.
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