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Updated: May 26, 2026

Kinase Inhibitor Screening In Self-assembled Human Protein Microarrays
Published on: October 23, 2019
BIM expression in treatment-naive cancers predicts responsiveness to kinase inhibitors
Anthony C Faber1, Ryan B Corcoran, Hiromichi Ebi
1Massachusetts General Hospital Cancer Center, and Department of Medicine, Harvard Medical School, Boston, Massachusetts 02129, USA.
Abstract:
Cancers with specific genetic mutations are susceptible to selective kinase inhibitors. However, there is a wide spectrum of benefit among cancers harboring the same sensitizing genetic mutations. Herein, we measured apoptotic rates among cell lines sharing the same driver oncogene following treatment with the corresponding kinase inhibitor. There was a wide range of kinase inhibitor-induced apoptosis despite comparable inhibition of the target and associated downstream signaling pathways. Surprisingly, pretreatment RNA levels of the BH3-only pro-apoptotic BIM strongly predicted the capacity of EGFR, HER2, and PI3K inhibitors to induce apoptosis in EGFR-mutant, HER2-amplified, and PIK3CA-mutant cancers, respectively, but BIM levels did not predict responsiveness to standard chemotherapies. Furthermore, BIM RNA levels in EGFR-mutant lung cancer specimens predicted response and duration of clinical benefit from EGFR inhibitors. These findings suggest assessment of BIM levels in treatment-naïve tumor biopsies may indicate the degree of benefit from single-agent kinase inhibitors in multiple oncogene-addiction paradigms.
Insights
Pretreatment BIM RNA levels predict cancer cell apoptosis from kinase inhibitors, not standard therapies. This biomarker may guide targeted therapy selection for oncogene-addicted cancers.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Targeted kinase inhibitors offer selective treatment for cancers with specific genetic mutations.
- However, patient responses to these therapies vary significantly, even among cancers with identical driver mutations.
Purpose of the Study:
- To investigate the variability in apoptotic rates among cancer cell lines with shared driver oncogenes after kinase inhibitor treatment.
- To identify predictive biomarkers for response to kinase inhibitors.
Main Methods:
- Assessed apoptosis rates in cancer cell lines with common driver oncogenes upon treatment with corresponding kinase inhibitors.
- Measured pre-treatment RNA levels of the BH3-only pro-apoptotic protein BIM.
- Correlated BIM RNA levels with apoptosis and clinical response in EGFR-mutant lung cancer specimens.
Main Results:
- Significant variation in kinase inhibitor-induced apoptosis was observed, despite comparable target inhibition.
- Pre-treatment BIM RNA levels strongly predicted apoptosis induction by EGFR, HER2, and PI3K inhibitors in relevant cancer models.
- BIM RNA levels did not predict response to conventional chemotherapies.
- In EGFR-mutant lung cancer, BIM RNA levels correlated with response and duration of clinical benefit from EGFR inhibitors.
Conclusions:
- BIM RNA levels serve as a potential predictive biomarker for response to single-agent kinase inhibitors in various oncogene-addiction contexts.
- Assessing BIM levels in treatment-naïve biopsies may help personalize targeted therapy selection and predict patient benefit.
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