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Updated: May 26, 2026

Assessment of Global DNA Double-Strand End Resection using BrdU-DNA Labeling coupled with Cell Cycle Discrimination Imaging
Published on: April 28, 2021
Inhibition of homologous recombination by the PCNA-interacting protein PARI
George-Lucian Moldovan1, Donniphat Dejsuphong, Mark I R Petalcorin
1Department of Radiation Oncology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02215, USA.
Abstract:
Inappropriate homologous recombination (HR) causes genomic instability and cancer. In yeast, the UvrD family helicase Srs2 is recruited to sites of DNA replication by SUMO-modified PCNA, where it acts to restrict HR by disassembling toxic RAD51 nucleofilaments. How human cells control recombination at replication forks is unknown. Here, we report that the protein PARI, containing a UvrD-like helicase domain, is a PCNA-interacting partner required for preservation of genome stability in human and DT40 chicken cells. Using cell-based and biochemical assays, we show that PARI restricts unscheduled recombination by interfering with the formation of RAD51-DNA HR structures. Finally, we show that PARI knockdown suppresses the genomic instability of Fanconi Anemia/BRCA pathway-deficient cells. Thus, we propose that PARI is a long sought-after factor that suppresses inappropriate recombination events at mammalian replication forks.
Insights
Human cells utilize PARI protein to prevent genomic instability by limiting DNA repair via homologous recombination (HR) at replication forks. PARI
Area of Science:
- Molecular Biology
- Genetics
- Cancer Research
Background:
- Inappropriate homologous recombination (HR) is a significant driver of genomic instability and cancer development.
- In yeast, the Srs2 helicase, recruited by SUMO-modified PCNA, disassembles RAD51 nucleofilaments to restrict HR at replication forks.
- Mechanisms controlling HR at human replication forks remain largely uncharacterized.
Purpose of the Study:
- To identify and characterize human proteins that regulate homologous recombination (HR) at DNA replication forks.
- To investigate the role of the protein PARI in maintaining genome stability and suppressing unscheduled recombination.
Main Methods:
- Utilized cell-based assays and biochemical experiments to study PARI function.
- Investigated PARI's interaction with PCNA (proliferating cell nuclear antigen).
- Assessed PARI's effect on RAD51-DNA structure formation and genomic instability in various cell types, including Fanconi Anemia/BRCA pathway-deficient cells.
Main Results:
- Identified PARI, a protein with a UvrD-like helicase domain, as a PCNA-interacting partner crucial for genome stability in human and chicken cells.
- Demonstrated that PARI actively restricts unscheduled homologous recombination (HR) by preventing the formation of RAD51-DNA structures.
- Showed that PARI depletion exacerbates genomic instability in cells deficient in the Fanconi Anemia/BRCA pathway.
Conclusions:
- PARI functions as a key regulator suppressing inappropriate homologous recombination (HR) at mammalian replication forks.
- PARI's activity is essential for preserving genome stability, particularly in the context of DNA replication.
- PARI represents a potential therapeutic target for mitigating genomic instability in cancer.
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