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Quantitative Analysis of Autophagy using Advanced 3D Fluorescence Microscopy
Published on: May 3, 2013
Non-coding rRNA-mediated preferential killing in cancer cells is enhanced by suppression of autophagy in
C J Hwang1, J R Fields, Y-H Shiao
1Laboratory of Comparative Carcinogenesis, National Cancer Institute at Frederick, Frederick, MD, USA.
Abstract:
Interest to anticancer agents targeting rRNA biogenesis is growing. Cis-non-coding rRNAs, alternative to primary rRNA, have been shown to regulate rRNA biogenesis. We have recently detected bidirectional non-coding rRNAs that carry ribozyme-like properties. Anti-antisense oligonucleotides complementary to antisense non-coding rRNAs markedly stabilized the bidirectional transcripts and induced cell death in mouse lung cells. Here, we demonstrated that the same oligonucleotide killed mouse lung-cancer cells preferentially, compared with non-cancer sister lines, suggesting its potential utility for cancer treatment. A human version of anti-antisense oligonucleotide, complementary to an rDNA intergenic site, mediated apoptosis primarily in cancer cells. Autophagic activation was largely undifferentiable between the anti-antisense and other oligonucleotides and accounted for the undesired cytotoxicity in non-cancer cells. Co-treatment with chloroquine, an autophagy inhibitor, reduced cytotoxicity in the non-cancer cells, but retained the anti-antisense-mediated killings in cancer cells. Furthermore, the anti-antisense oligonucleotide stabilized bidirectional non-coding rRNAs predominantly in human cancer cells and perturbed rRNA biogenesis. Contributions of non-coding rRNAs to cell death were proven by transfection of in -vitro-synthesized transcripts. Taken together, cancer/non-cancer cells respond differently to stabilization of non-coding rRNAs, and such differential responses provide a window of opportunity to enhance anticancer efficacy.
Insights
Anticancer agents targeting rRNA biogenesis show promise. Anti-antisense oligonucleotides stabilize non-coding RNAs, preferentially killing cancer cells by disrupting rRNA production, offering a new therapeutic strategy.
Area of Science:
- Molecular Biology
- Cancer Research
- Drug Discovery
Background:
- Growing interest in targeting ribosomal RNA (rRNA) biogenesis for anticancer therapies.
- Discovery of cis-non-coding rRNAs as regulators of rRNA biogenesis.
- Identification of bidirectional non-coding RNAs with ribozyme-like properties.
Purpose of the Study:
- To investigate the anticancer potential of anti-antisense oligonucleotides targeting non-coding RNAs.
- To determine the mechanism of selective cancer cell killing.
- To explore the role of rRNA biogenesis and autophagy in the observed effects.
Main Methods:
- Administration of anti-antisense oligonucleotides to mouse lung cells and human cancer cell lines.
- Assessment of cell viability, apoptosis, and autophagy.
- Analysis of bidirectional non-coding RNA stabilization and rRNA biogenesis.
- In vitro transfection with synthesized non-coding RNA transcripts.
Main Results:
- Anti-antisense oligonucleotides preferentially induced cell death in mouse lung-cancer cells and human cancer cells.
- Selective killing was linked to the stabilization of bidirectional non-coding RNAs and perturbation of rRNA biogenesis in cancer cells.
- Autophagy contributed to cytotoxicity in non-cancer cells, which was mitigated by chloroquine co-treatment.
- In vitro synthesized non-coding RNAs confirmed their role in cell death.
Conclusions:
- Differential responses of cancer and non-cancer cells to non-coding RNA stabilization present a therapeutic window.
- Anti-antisense oligonucleotides targeting non-coding RNAs offer a promising strategy for cancer treatment.
- Modulating rRNA biogenesis via non-coding RNAs represents a novel anticancer approach.
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