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Published on: September 11, 2020
Multidrug-resistant Streptococcus pneumoniae serotype 6D clones in South Korea
Kwan Soo Ko1, Jin Yang Baek, Jae-Hoon Song
1Department of Molecular Cell Biology, Samsung Biomedical Research Institute, Sungkyunkwan University School of Medicine, Suwon, South Korea. ksko@skku.edu
Abstract:
To investigate the characteristics of main Streptococcus pneumoniae clones of serotype 6D (ST282 and ST3171) in South Korea, antimicrobial susceptibility testing was performed, and 11 genes around the cps locus were sequenced on ST282(6D), ST3171(6D), and ST81(6A) isolates. The antimicrobial susceptibility patterns were very similar between clones belonging to the same clonal complex, ST81(6A) and ST282(6D); nonsusceptibilities to penicillin and cefuroxime, high MICs of ceftriaxone, and high resistance rates to trimethoprim-sulfamethoxazole. However, ST3171(6D) isolates showed resistance to only macrolides and clindamycin. The sequences of 11 genes around the cps locus indicated the same genetic backgrounds between the ST81(6A) and ST282(6D) isolates. On the other hand, ST3171(6D) isolates showed nucleotide and amino acid differences from ST81(6A) and ST282(6D) isolates in most genes, indicating a different genetic background. The mosaic structure of dexB gene in ST282(6D) isolates indicated that recombination might occur in the dexB gene. Our results suggest that the multidrug-resistant ST282(6D) pneumococcal clone has emerged by serial genetic recombination, including capsular switch.
Insights
Multidrug-resistant Streptococcus pneumoniae serotype 6D clones in South Korea exhibit distinct genetic backgrounds. Clone ST282(6D) likely emerged through recombination and capsular switching, unlike ST3171(6D).
Area of Science:
- Microbiology
- Genetics
- Epidemiology
Background:
- Streptococcus pneumoniae serotype 6D is an emerging clone.
- Understanding its genetic characteristics and antimicrobial resistance is crucial.
Purpose of the Study:
- To investigate the genetic features and antimicrobial susceptibility of Streptococcus pneumoniae serotype 6D clones (ST282 and ST3171) in South Korea.
- To compare these clones with a related serotype 6A clone (ST81).
Main Methods:
- Antimicrobial susceptibility testing was performed on isolates.
- Sequencing of 11 genes around the cps locus was conducted for ST282(6D), ST3171(6D), and ST81(6A) isolates.
Main Results:
- ST81(6A) and ST282(6D) showed similar antimicrobial resistance patterns (penicillin, cefuroxime, ceftriaxone, trimethoprim-sulfamethoxazole).
- ST3171(6D) isolates were resistant only to macrolides and clindamycin.
- Genetic analysis revealed shared backgrounds between ST81(6A) and ST282(6D), but distinct backgrounds for ST3171(6D).
- Mosaic structure in the dexB gene of ST282(6D) suggests recombination.
Conclusions:
- The multidrug-resistant ST282(6D) clone likely emerged via genetic recombination, including capsular switching.
- ST3171(6D) represents a genetically distinct serotype 6D clone.
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