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A Bioinformatics Pipeline to Accurately and Efficiently Analyze the MicroRNA Transcriptomes in Plants
Published on: January 21, 2020
Deep sequencing of small RNAs in plants: applied bioinformatics
1University of Exeter, Exeter EX4 4QD, UK. d.j.studholme@exeter.ac.uk
Briefings in Functional Genomics
|December 21, 2011
Abstract:
Small RNAs, including microRNA and short-interfering RNAs, play important roles in plants. In recent years, developments in sequencing technology have enabled the large-scale discovery of sRNAs in various cells, tissues and developmental stages and in response to various stresses. This review describes the bioinformatics challenges to analysing these large datasets of short-RNA sequences and some of the solutions to those challenges.
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