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Published on: September 16, 2022
Development and validation of clinical prediction models: marginal differences between logistic regression, penalized
Kristel J M Janssen1, Ivar Siccama, Yvonne Vergouwe
1Julius Center for Health Sciences and Primary Care, University Medical Center Utrecht, Utrecht, The Netherlands. kristel.janssen@mapigroup.com
Developing deep venous thrombosis (DVT) prediction models using different methods yielded similar accuracy. Sensible modeling strategies, not complexity, are key for accurate DVT prediction.
Area of Science:
- Medical Informatics
- Clinical Prediction Modeling
- Biostatistics
Background:
- Multivariable logistic regression is a common method for developing clinical prediction models.
- Alternative methods for model development exist but are less frequently compared.
Purpose of the Study:
- To compare the predictive accuracy of deep venous thrombosis (DVT) models developed using four distinct methods.
- To evaluate the impact of different modeling strategies on model performance.
Main Methods:
- A cohort of 2,086 primary care patients suspected of DVT was used.
- Models were developed using logistic regression, shrinkage with bootstrapping, penalized maximum likelihood estimation, and genetic programming.
- Model accuracy was assessed using discrimination and calibration in validation and cross-validation sets.
Main Results:
- Marginal differences in discrimination and calibration were observed across the four modeling methods.
- Confidence intervals for accuracy measures largely overlapped between the models.
Conclusions:
- The choice of development method had minimal impact on the predictive accuracy of DVT models.
- Effective prediction models rely more on sound modeling strategies than on methodological complexity.
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