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Updated: May 26, 2026

CorrelationCalculator and Filigree: Tools for Data-Driven Network Analysis of Metabolomics Data
Published on: November 10, 2023
NetSeed: a network-based reverse-ecology tool for calculating the metabolic interface of an organism with its
Rogan Carr1, Elhanan Borenstein
1Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Unlabelled:
NetSeed is a web tool and Perl module for analyzing the topology of metabolic networks and calculating the set of exogenously acquired compounds. NetSeed is based on the seed detection algorithm, developed and validated in previous studies.
Availability:
The NetSeed web-based tool, open-source Perl module, examples and documentation are freely available online at: http://depts.washington.edu/elbogs/NetSeed.
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