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Minimal absent words in four human genome assemblies.

Sara P Garcia1, Armando J Pinho

  • 1Signal Processing Laboratory, Institute of Electronics and Telematics Engineering of Aveiro, University of Aveiro, Aveiro, Portugal. spgarcia@ua.pt

Plos One
|January 6, 2012
PubMed
Summary

Human genome variation was studied using minimal absent words across four assemblies. Sequencing and assembly methods significantly impact large word variations, with capillary-based assemblies showing more similarity.

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