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Updated: May 25, 2026

Techniques to Induce and Quantify Cellular Senescence
Published on: May 1, 2017
Autophagy-dependent senescence in response to DNA damage and chronic apoptotic stress
Kamini Singh1, Shigemi Matsuyama, Judith A Drazba
1Department of Cancer Biology, Lerner Research Institute, Cleveland Clinic, Cleveland, OH, USA.
Abstract:
Autophagy regulates cell survival and cell death upon various cellular stresses, yet the molecular signaling events involved are not well defined. Here, we established the function of a proteolytic Cyclin E fragment (p18-CycE) in DNA damage-induced autophagy, apoptosis, and senescence. p18-CycE was identified in hematopoietic cells undergoing DNA damage-induced apoptosis. In epithelial cells exposed to DNA damage, chronic but not transient expression of p18-CycE leads to higher turnover of LC3 I/II and increased emergence of autophagosomes and autolysosomes. Levels of p18-CycE, which was generated by proteolytic cleavage of endogenous Cyclin E, were greatly increased by chloroquine and correlated with LC 3II conversion. Preventing p18-CycE genesis blocked conversion of LC3 I to LC3 II. Upon DNA damage, cytoplasmic ataxia-telangiectasia-mutated (ATM) was phosphorylated in p18-CycE-expressing cells resulting in sustained activation of the adenosine-mono-phosphate-dependent kinase (AMPK). These lead to sustained activation of mammalian autophagy-initiating kinase ULK1, which was abrogated upon inhibiting ATM and AMPK phosphorylation. Moreover, p18-CycE was degraded via autophagy followed by induction of senescence. Both autophagy and senescence were prevented by inhibiting autophagy, which leads to increased apoptosis in p18-CycE-expressing cells by stabilizing p18-CycE expression. Senescence was further associated with cytoplasmic co-localization and degradation of p18-CycE and Ku70. In brief, chronic p18-CycE expression-induced autophagy leads to clearance of p18-CycE following DNA damage and induction of senescence. Autophagy inhibition stabilized the cytoplasmic p18-CycE-Ku70 complex leading to apoptosis. Thus, our findings define how chronic apoptotic stress and DNA damage initiate autophagy and regulate cell survival through senescence and/or apoptosis.
Insights
A Cyclin E fragment (p18-CycE) drives autophagy and senescence following DNA damage. Autophagy inhibition promotes apoptosis by stabilizing p18-CycE, revealing new cell survival pathways.
Area of Science:
- Cellular Biology
- Molecular Biology
- Biochemistry
Background:
- Autophagy is crucial for cell survival and death under stress, but its molecular regulation remains unclear.
- DNA damage triggers complex cellular responses including autophagy, apoptosis, and senescence.
- The role of specific protein fragments in these stress responses is an active area of research.
Purpose of the Study:
- To elucidate the function of a proteolytic Cyclin E fragment (p18-CycE) in DNA damage-induced cellular processes.
- To investigate the signaling pathways linking p18-CycE to autophagy, apoptosis, and senescence.
- To define the role of p18-CycE in regulating cell fate decisions following DNA damage.
Main Methods:
- Identification of p18-CycE in hematopoietic cells undergoing DNA damage-induced apoptosis.
- Analysis of LC3 I/II turnover, autophagosome formation, and autolysosome emergence in epithelial cells with chronic p18-CycE expression.
- Investigation of the role of ataxia-telangiectasia-mutated (ATM) and adenosine-mono-phosphate-dependent kinase (AMPK) signaling pathways.
- Assessment of p18-CycE degradation via autophagy and its impact on senescence and apoptosis induction.
- Examination of p18-CycE and Ku70 co-localization and degradation.
Main Results:
- Chronic p18-CycE expression induces autophagy, evidenced by increased LC3 I/II turnover and autophagosome/autolysosome formation.
- p18-CycE activates ATM and AMPK signaling, leading to sustained ULK1 activation, a key autophagy initiator.
- p18-CycE is degraded through autophagy, promoting senescence; inhibiting autophagy stabilizes p18-CycE, leading to apoptosis.
- Senescence involves cytoplasmic co-localization and degradation of p18-CycE and Ku70.
Conclusions:
- Chronic p18-CycE expression initiates autophagy, which clears p18-CycE and induces senescence after DNA damage.
- Autophagy inhibition stabilizes the p18-CycE-Ku70 complex, promoting apoptosis, thus highlighting a critical role in cell fate determination.
- These findings reveal a novel mechanism by which DNA damage and apoptotic stress regulate autophagy, senescence, and apoptosis for cell survival.
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