Solution NMR of a 463-residue phosphohexomutase: domain 4 mobility, substates, and phosphoryl transfer defect

Akella V S Sarma1, Asokan Anbanandam, Allek Kelm

  • 1Biochemistry Department, University of Missouri, Columbia, Missouri 65211, United States.

Biochemistry
|January 17, 2012
PubMed

Insights

Phosphomannomutase/phosphoglucomutase enzyme activity is crucial for Pseudomonas aeruginosa infectivity. NMR studies reveal its structural dynamics and how mutations affect substrate processing and enzyme function.

Area of Science:

  • Biochemistry
  • Structural Biology
  • Microbiology

Background:

  • Phosphomannomutase/phosphoglucomutase is vital for Pseudomonas aeruginosa virulence.
  • Understanding its catalytic mechanism and structural dynamics is key to developing anti-infective strategies.

Purpose of the Study:

  • To elucidate the structural and dynamic properties of phosphomannomutase/phosphoglucomutase.
  • To investigate the impact of the S108C mutation on enzyme activity and conformation.

Main Methods:

  • Nuclear Magnetic Resonance (NMR) spectroscopy (1H, 13C, 15N) to analyze enzyme structure and dynamics.
  • Site-directed mutagenesis (S108C) to probe enzyme function.
  • Analysis of substrate and intermediate binding kinetics.

Main Results:

  • NMR analysis confirmed high structural similarity between solution and crystal structures.
  • The S108C mutation impaired catalytic efficiency (kcat) but was partially rescued by the glucose 1,6-bisphosphate intermediate.
  • NMR data indicated millisecond-timescale dynamics in flexible loops and distinct rotational dynamics of domain 4.

Conclusions:

  • The enzyme's conformational flexibility, particularly domain 4 rotation, is integral to its catalytic cycle.
  • Substrate phosphorylation state and conformational dynamics influence enzyme activity and substrate processing.
  • These findings provide insights into Pseudomonas aeruginosa infectivity mechanisms.

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