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Reduced DICER1 elicits an interferon response in endometrial cancer cells
Katherine B Chiappinelli1, Brian C Haynes, Michael R Brent
1Department of Surgery, Division of Gynecologic Oncology, Washington University School of Medicine, 660 South Euclid Avenue, Saint Louis, MO 63110, USA. chiappinellik@wudosis.wustl.edu
Abstract:
DICER1 is essential for the generation of mature miRNAs and other short noncoding RNAs. Several lines of investigation implicate DICER1 as a tumor suppressor. Reduced DICER1 levels and changes in miRNA abundance have been associated with aggressive tumor phenotypes. The global effects of reduced DICER1 on mRNA transcript abundance in tumor cells remain largely unknown. We used short hairpin RNA to stably knock down DICER1 in endometrial cancer cell lines to begin to determine how reduced DICER1 activity contributes to tumor phenotypes. DICER1 knockdown did not affect cell proliferation but caused enhanced cell migration and growth in soft agar. miRNA and mRNA profiling in KLE cells revealed overall decreases in miRNA levels and changes in the relative abundance of many mRNAs. One of the most striking changes in mRNA levels was the upregulation of IFN-stimulated genes (ISG), the majority of which lack known miRNA target sequences. IFNβ, a key upstream regulator of the IFN response, was significantly increased in DICER1 knockdowns in the AN3CA, Ishikawa, and KLE endometrial cancer cell lines and in the normal endometrial cell line EM-E6/E7/TERT. IFNβ secreted in media from KLE and EM-E6/E7/TERT shDcr cells was sufficient to activate an IFN response in HT29 cells. The reduced miRNA processing in DICER1 knockdowns was associated with increases in pre-miRNAs in the cytoplasm. Our findings suggest that elevated pre-miRNA levels trigger the IFN response to double-stranded RNA. We thus report a novel effect of reduced DICER1 function in cancer cells.
Insights
Reduced DICER1 function in endometrial cancer cells enhances migration and growth. This leads to increased pre-miRNA levels, triggering an interferon response, a novel finding in cancer cells.
Area of Science:
- Molecular Biology
- Cancer Research
- RNA Biology
Background:
- DICER1 is crucial for microRNA (miRNA) biogenesis and is implicated as a tumor suppressor.
- Reduced DICER1 levels correlate with aggressive tumor phenotypes, but its global impact on mRNA in tumors is unclear.
- Endometrial cancer is a significant health concern, and understanding DICER1's role is vital for therapeutic strategies.
Purpose of the Study:
- To investigate the global effects of DICER1 knockdown on mRNA transcript abundance in endometrial cancer cells.
- To determine how reduced DICER1 activity contributes to specific tumor phenotypes like migration and growth.
- To elucidate the molecular mechanisms linking DICER1 deficiency to cellular changes, including potential interferon pathway activation.
Main Methods:
- Stable knockdown of DICER1 using short hairpin RNA (shRNA) in endometrial cancer cell lines (KLE, AN3CA, Ishikawa).
- Cell proliferation, migration, and soft agar colony formation assays to assess tumor phenotypes.
- miRNA and mRNA profiling to analyze global changes in RNA abundance.
- Interferon-stimulated gene (ISG) and Interferon-beta (IFNβ) expression analysis.
- Assessment of pre-miRNA levels in the cytoplasm.
Main Results:
- DICER1 knockdown did not affect cell proliferation but significantly enhanced cell migration and soft agar growth.
- Global miRNA levels decreased, while specific mRNA levels changed, notably the upregulation of IFN-stimulated genes (ISGs).
- Interferon-beta (IFNβ) levels were significantly increased in DICER1-knockdown cells and sufficient to activate an interferon response in other cells.
- Reduced miRNA processing correlated with increased cytoplasmic pre-miRNA levels.
Conclusions:
- Reduced DICER1 function in endometrial cancer cells promotes migration and growth, independent of proliferation.
- Elevated pre-miRNA levels resulting from impaired DICER1 processing appear to trigger an interferon response.
- This study reveals a novel mechanism where reduced DICER1 function activates the interferon pathway in cancer cells, offering new therapeutic insights.
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