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Conservation and divergence of Grb7 family of Ras-binding domains
Raju V S Rajala1, Ammaji Rajala, Vivek K Gupta
1Department of Ophthalmology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA. raju-rajala@ouhsc.edu
Abstract:
Ras proteins are signal-transducing GTPases that cycle between inactive GDP-bound and active GTP-bound forms. Ras is a prolific signaling molecule interacting with a spectrum of effector molecules and acting through more than one signaling pathway. The Ras-effector proteins contain a Ras-associating (RA) domain through which these associate with Ras in a GTP-dependent manner. The RA domain is highly conserved among the members of the growth factor receptor-bound (Grb) 7 family of proteins which includes Grb7, Grb10 and Grb14. Our laboratory has reported an unusual observation that RA domain of Grb14 binds to the C-terminal nucleotide binding site of cyclic nucleotide gated channel (CTRCNGA1) and inhibits the channel activity. Molecular modeling of the CTR-CNGA1 displays 50%-70% tertiary structural similarity towards Ras proteins. We named this region as Ras-like domain (RLD). The interaction between RA-Grb14 and RLD-CNGA1 is mediated through a simple protein-protein interaction temporally and spatially regulated by light and cGMP. It is interesting to note that Grb14 binds to GTPase-mutant Rab5, a Ras-related small GTPase whereas Grb10 binds only to GTP-bound form of active Rab5 but not to GTPase-defective mutant Rab5. These results suggest that Grb14 might have been evolved later in the evolution that binds to both Ras and nucleotide binding proteins such as CNGA1. Our studies also suggest that eukaryotic CNG channels could be evolved through a gene fusion between prokaryotic ion channels and cyclic nucleotide binding proteins, both of which might have undergone several sequence variations for functional adaptation during evolution.
Insights
The Grb14 protein
Area of Science:
- Molecular biology
- Cell signaling
- Protein-protein interactions
Background:
- Ras proteins are key signal transducers, cycling between GDP-bound (inactive) and GTP-bound (active) states.
- Ras-effector proteins utilize Ras-associating (RA) domains for GTP-dependent binding.
- The Grb7 family (Grb7, Grb10, Grb14) features conserved RA domains.
Purpose of the Study:
- To investigate the interaction between the Grb14 RA domain and the cyclic nucleotide-gated ion channel A1 (CTRCNGA1).
- To explore the functional implications of this interaction on channel activity and its evolutionary context.
Main Methods:
- Molecular modeling to assess structural similarities between CTRCNGA1 and Ras proteins.
- Analysis of protein-protein interactions mediated by light and cyclic GMP (cGMP).
- Comparative binding studies of Grb14 and Grb10 with Rab5 GTPase variants.
Main Results:
- The RA domain of Grb14 binds to the C-terminal nucleotide-binding site of CTRCNGA1, inhibiting channel activity.
- CTRCNGA1 possesses a Ras-like domain (RLD) with 50%-70% tertiary structural similarity to Ras.
- Grb14 interacts with both Ras and nucleotide-binding proteins, suggesting later evolutionary development.
Conclusions:
- Eukaryotic CNG channels may have evolved via gene fusion of prokaryotic ion channels and cyclic nucleotide-binding proteins.
- Grb14's dual binding capability to Ras and nucleotide-binding proteins highlights its unique evolutionary trajectory.
- The interaction between Grb14 and CTRCNGA1 is a novel, light and cGMP-regulated protein-protein interaction.
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