Related Experiment Video
Updated: May 25, 2026

A Reporter Assay to Analyze Intronic microRNA Maturation in Mammalian Cells
Published on: June 16, 2022
A p53-inducible microRNA-34a downregulates Ras signaling by targeting IMPDH
Hwa-Ryeon Kim1, Jae-Seok Roe, Ji-Eun Lee
1National Research Laboratory for Metabolic Checkpoint, Departments of Biomedical Sciences and Biochemistry and Molecular Biology, Seoul National University College of Medicine, Seoul 110-799, Republic of Korea.
Abstract:
p53 is a well-known transcription factor that controls cell cycle arrest and cell death in response to a wide range of stresses. Moreover, p53 regulates glucose metabolism and its mutation results in the metabolic switch to the Warburg effect found in cancer cells. Nucleotide biosynthesis is also critical for cell proliferation and the cell division cycle. Nonetheless, little is known about whether p53 regulates nucleotide biosynthesis. Here we demonstrated that p53-inducible microRNA-34a (miR-34a) repressed inosine 5'-monophosphate dehydrogenase (IMPDH), a rate-limiting enzyme of de novo GTP biosynthesis. Treatment with anti-miR-34a inhibitor relieved the expression of IMPDH upon DNA damage. Ultimately, miR-34a-mediated inhibition of IMPDH resulted in repressed activation of the GTP-dependent Ras signaling pathway. In summary, we suggest that p53 has a novel function in regulating purine biosynthesis, aided by miR-34a-dependent IMPDH repression.
Insights
The tumor suppressor p53, via microRNA-34a (miR-34a), represses guanosine triphosphate (GTP) biosynthesis by inhibiting IMPDH. This pathway regulates cell proliferation and Ras signaling, revealing a novel role for p53 in purine metabolism.
Area of Science:
- Molecular Biology
- Cancer Biology
- Cell Metabolism
Background:
- The p53 protein is a crucial transcription factor regulating cell cycle arrest and apoptosis in response to cellular stress.
- p53 influences glucose metabolism, and its dysfunction is linked to the Warburg effect observed in cancer.
- Nucleotide biosynthesis is essential for cell proliferation, but p53's role in this process remains largely unexplored.
Purpose of the Study:
- To investigate whether the p53 pathway regulates nucleotide biosynthesis.
- To elucidate the role of microRNA-34a (miR-34a) in p53-mediated metabolic control.
- To determine the impact of p53-regulated nucleotide synthesis on downstream signaling pathways.
Main Methods:
- Analysis of p53-inducible microRNA-34a (miR-34a) expression.
- Assessment of inosine 5'-monophosphate dehydrogenase (IMPDH) activity and expression levels.
- Utilizing anti-miR-34a inhibitors to modulate miR-34a activity.
- Investigating the activation status of the GTP-dependent Ras signaling pathway.
Main Results:
- p53-inducible miR-34a was found to repress IMPDH, a key enzyme in de novo GTP biosynthesis.
- Inhibition of miR-34a using an anti-miR-34a inhibitor restored IMPDH expression following DNA damage.
- miR-34a-mediated repression of IMPDH led to reduced activation of the Ras signaling pathway.
Conclusions:
- p53 exerts a novel regulatory function over purine biosynthesis through miR-34a-mediated repression of IMPDH.
- This mechanism highlights a new link between p53, nucleotide metabolism, and cell signaling.
- The findings provide insights into how p53 controls cellular metabolism and proliferation.
Related Concept Videos
Experimental RNAi
MicroRNAs
MicroRNAs
Abnormal Proliferation
The Ras Gene
Ras is a superfamily...
RNA Interference
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...

