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Updated: May 25, 2026

Purification of Ubiquitinated p53 Proteins from Mammalian Cells
Published on: March 21, 2022
Small molecules that bind the Mdm2 RING stabilize and activate p53
Patricia Roxburgh1, Andreas K Hock, Michael P Dickens
1The Beatson Institute for Cancer Research, Garscube Estate, Switchback Road, Glasgow G61 1BD, UK.
Abstract:
p53 is a tumor suppressor that responds to a variety of stresses such as oncogenes and DNA damage by activating its transcriptional targets to allow repair or elimination of damaged cells. In the absence of stress signals, p53 needs to be kept in check and this is achieved by the E3 ligase MDM2. For tumors that retain wild-type p53, therapeutic strategies aimed at removing the inhibitory activity of MDM2 on p53 are under development and to date have focused on drugs that prevent the binding of p53 to MDM2. Here, we report the analysis of a group of synthetic analogs derived from 5-deazaflavin compounds previously identified in a screen as inhibitors of MDM2 autoubiquitination. Using measurement of surface plasmon resonance, we demonstrated that active 5-deazaflavin analogs bind to the MDM2 RING, whereas inactive compounds show no binding. In cellular assays, these active MDM2 RING binding compounds inhibited the ubiquitination of p53, stabilized p53, led to increased expression of p53 targets and caused corresponding cell cycle effects. Deazaflavin analogs therefore function to activate p53 through a novel mechanism, by inhibiting the E3 ligase activity of MDM2 in a manner that involves binding to the MDM2 RING.
Insights
New 5-deazaflavin analogs activate the tumor suppressor p53 by inhibiting MDM2
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- p53 is a crucial tumor suppressor.
- MDM2 negatively regulates p53 activity.
- Targeting MDM2 is a therapeutic strategy for wild-type p53 tumors.
Purpose of the Study:
- To analyze synthetic 5-deazaflavin analogs as potential MDM2 inhibitors.
- To investigate the mechanism of action of these analogs.
Main Methods:
- Surface plasmon resonance to assess binding to MDM2 RING.
- Cellular assays to evaluate p53 ubiquitination, stabilization, and target gene expression.
Main Results:
- Active 5-deazaflavin analogs bind to the MDM2 RING.
- These compounds inhibit p53 ubiquitination and stabilize p53.
- Increased p53 target gene expression and cell cycle effects were observed.
Conclusions:
- 5-deazaflavin analogs activate p53 via a novel mechanism.
- Inhibition of MDM2 E3 ligase activity by binding to the MDM2 RING is demonstrated.
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