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Published on: February 10, 2023
DNA replication stress differentially regulates G1/S genes via Rad53-dependent inactivation of Nrm1
Anna Travesa1, Dwight Kuo, Robertus A M de Bruin
1Department of Molecular Biology, The Scripps Research Institute, La Jolla, CA, USA.
Abstract:
MBF and SBF transcription factors regulate a large family of coordinately expressed G1/S genes required for early cell-cycle functions including DNA replication and repair. SBF is inactivated upon S-phase entry by Clb/CDK whereas MBF targets are repressed by the co-repressor, Nrm1. Using genome-wide expression analysis of cells treated with methyl methane sulfonate (MMS), hydroxyurea (HU) or camptothecin (CPT), we show that genotoxic stress during S phase specifically induces MBF-regulated genes. This occurs via direct phosphorylation of Nrm1 by Rad53, the effector checkpoint kinase, which prevents its binding to MBF target promoters. We conclude that MBF-regulated genes are distinguished from SBF-regulated genes by their sensitivity to activation by the S-phase checkpoint, thereby, providing an effective mechanism for enhancing DNA replication and repair and promoting genome stability.
Insights
Genotoxic stress during S phase activates MBF-regulated genes by preventing Nrm1 binding. This checkpoint activation enhances DNA replication and repair, promoting genome stability.
Area of Science:
- Cell Biology
- Molecular Biology
- Genetics
Background:
- MBF and SBF transcription factors control G1/S genes essential for DNA replication and repair.
- SBF is inactivated by Clb/CDK upon S-phase entry, while MBF targets are repressed by Nrm1.
Purpose of the Study:
- To investigate how genotoxic stress during S phase affects MBF and SBF-regulated genes.
- To elucidate the mechanism by which the S-phase checkpoint regulates MBF targets.
Main Methods:
- Genome-wide expression analysis.
- Treatment of cells with genotoxic agents: methyl methane sulfonate (MMS), hydroxyurea (HU), and camptothecin (CPT).
Main Results:
- Genotoxic stress specifically induces MBF-regulated genes during S phase.
- Rad53, an effector checkpoint kinase, phosphorylates Nrm1, preventing its promoter binding.
- This mechanism distinguishes MBF-regulated genes by their sensitivity to S-phase checkpoint activation.
Conclusions:
- MBF-regulated genes are activated by the S-phase checkpoint under genotoxic stress.
- This activation enhances DNA replication and repair processes.
- The findings provide a mechanism for promoting genome stability during S phase.
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