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Updated: May 24, 2026

Phagocytosis Assay for Apoptotic Cells in Drosophila Embryos
Published on: August 3, 2017
The Drosophila TRPP cation channel, PKD2 and Dmel/Ced-12 act in genetically distinct pathways during apoptotic cell
Emeline Van Goethem1, Elizabeth A Silva, Hui Xiao
1Medical Research Council Cell Biology Unit, MRC Laboratory for Molecular Cell Biology and Anatomy and Developmental Biology Department, University College London, London, United Kingdom.
Abstract:
Apoptosis, a genetically programmed cell death, allows for homeostasis and tissue remodelling during development of all multi-cellular organisms. Phagocytes swiftly recognize, engulf and digest apoptotic cells. Yet, to date the molecular mechanisms underlying this phagocytic process are still poorly understood. To delineate the molecular mechanisms of apoptotic cell clearance in Drosophila, we have carried out a deficiency screen and have identified three overlapping phagocytosis-defective mutants, which all delete the fly homologue of the ced-12 gene, known as Dmel\ced12. As anticipated, we have found that Dmel\ced-12 is required for apoptotic cell clearance, as for its C. elegans and mammalian homologues, ced-12 and elmo, respectively. However, the loss of Dmel\ced-12 did not solely account for the phenotypes of all three deficiencies, as zygotic mutations and germ line clones of Dmel\ced-12 exhibited weaker phenotypes. Using a nearby genetically interacting deficiency, we have found that the polycystic kidney disease 2 gene, pkd2, which encodes a member of the TRPP channel family, is also required for phagocytosis of apoptotic cells, thereby demonstrating a novel role for PKD2 in this process. We have also observed genetic interactions between pkd2, simu, drpr, rya-r44F, and retinophilin (rtp), also known as undertaker (uta), a gene encoding a MORN-repeat containing molecule, which we have recently found to be implicated in calcium homeostasis during phagocytosis. However, we have not found any genetic interaction between Dmel\ced-12 and simu. Based on these genetic interactions and recent reports demonstrating a role for the mammalian pkd-2 gene product in ER calcium release during store-operated calcium entry, we propose that PKD2 functions in the DRPR/RTP pathway to regulate calcium homeostasis during this process. Similarly to its C. elegans homologue, Dmel\Ced-12 appears to function in a genetically distinct pathway.
Insights
This study identifies new genes involved in clearing apoptotic cells in Drosophila. The polycystic kidney disease 2 (PKD2) gene plays a crucial role in this essential cellular process.
Area of Science:
- Cell Biology
- Developmental Biology
- Genetics
Background:
- Apoptosis is essential for multicellular organism development and tissue homeostasis.
- Efficient clearance of apoptotic cells by phagocytes is critical.
- Molecular mechanisms of apoptotic cell clearance are not fully understood.
Purpose of the Study:
- To identify molecular mechanisms of apoptotic cell clearance in Drosophila.
- To investigate the roles of Dmel\ced12 and novel interacting genes in phagocytosis.
Main Methods:
- Conducted a deficiency screen in Drosophila to identify phagocytosis-defective mutants.
- Analyzed genetic interactions between identified genes.
- Investigated the role of PKD2 in apoptotic cell clearance.
Main Results:
- Identified Dmel\ced12 as essential for apoptotic cell clearance.
- Discovered a novel role for the polycystic kidney disease 2 (PKD2) gene in phagocytosis.
- PKD2 interacts with genes in the DRPR/RTP pathway, suggesting a role in calcium homeostasis.
Conclusions:
- Dmel\ced12 functions in a pathway distinct from the DRPR/RTP pathway.
- PKD2 is crucial for apoptotic cell clearance and likely regulates calcium homeostasis via the DRPR/RTP pathway.
- This research sheds light on the complex genetic regulation of efferocytosis.
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