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Related Concept Videos

What is Biodiversity?01:19

What is Biodiversity?

Biodiversity describes the variety of living things at multiple organizational levels: genetic, species and ecosystem diversity. Species diversity includes all branches of the evolutionary tree from single-celled prokaryotic organisms, bacteria, and archaea, to the eukaryotic kingdoms: plants; animals; fungi; and protists. To date, there have been about 1.75 million species identified, and new species are discovered every week.
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Microbial Classification System

Classification is the process of organizing organisms into hierarchically inclusive groups based on their phenotypic similarities or evolutionary relationships. A species comprises one or more strains, and closely related species are grouped into genera. Genera are further classified into families, families into orders, orders into classes, and so forth, up to the domain level, which is the broadest taxonomic rank derived from a combination of phenotypic and genotypic data.The nomenclature of...
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Threats to Biodiversity

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Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scaleĀ  studies have provided new insights into the evolutionary relationship between organisms.
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Data hosting infrastructure for primary biodiversity data.

Anthony Goddard1, Nathan Wilson, Phil Cryer

  • 1Center for Library and Informatics, Woods Hole Marine Biological Laboratory, Woods Hole, MA 02543, USA. agoddard@mbl.edu

BMC Bioinformatics
|March 1, 2012
PubMed
Summary
This summary is machine-generated.

Biodiversity data loss is a major concern. Investing in infrastructure and community efforts for data rescue, archival, and discovery is crucial for long-term preservation and accessibility.

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Area of Science:

  • Biodiversity Informatics
  • Data Science
  • Information Management

Background:

  • Unprecedented volumes of primary biodiversity data are generated globally.
  • Significant data loss occurs after project conclusion, hindering scientific progress.
  • There's a critical need for solutions to rescue, archive, and share biodiversity data.

Purpose of the Study:

  • To review the current state of biodiversity data hosting.
  • To identify technological and sociological barriers to effective data management.
  • To propose future directions for data preservation and discovery tools.

Main Methods:

  • Review of existing biodiversity data hosting practices.
  • Analysis of technological and sociological challenges in data management.
  • Exploration of data standards, licensing, and archival strategies.

Main Results:

  • Identified barriers to proper data management and long-term hosting.
  • Explored solutions for rescuing and re-hosting legacy biodiversity data.
  • Assessed the role of data standards and licensing in preservation.

Conclusions:

  • Community adoption of data standards and discovery tools is essential for preservation.
  • Promoting public domain licensing and establishing hosting centers are key.
  • Standardized archival policies require community-driven initiatives and infrastructure.