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Quantitative Analyses of all Influenza Type A Viral Hemagglutinins and Neuraminidases using Universal Antibodies in Simple Slot Blot Assays
Published on: April 4, 2011
Molecular characterization of a new hemagglutinin, subtype H14, of influenza A virus
Y Kawaoka1, S Yamnikova, T M Chambers
1St. Jude Children's Research Hospital, Department of Virology and Molecular Biology, Memphis, Tennessee 38101.
Abstract:
Two influenza A viruses whose hemagglutinin (HA) did not react with any of the reference antisera for the 13 recognized HA subtypes were isolated from mallard ducks in the USSR. Antigenic analysis by hemagglutination inhibition and double immunodiffusion tests showed that the HAs of these viruses are similar to each other but distinct from the HAs of other influenza A viruses. Nucleotide sequence analysis showed that these HA genes differ from each other by only 21 nucleotides. However, they differ from all other HA subtypes at the amino acid level by at least 31% in HAI. Thus, we propose that the HAs of these viruses [A/Mallard/Gurjev/263/82 (H14N5) and A/Mallard/Gurjev/244/82 (H14N6) belong to a previously unrecognized subtype, and are designated H14. Unlike any other HAs of influenza viruses, the H14 HAs contained lysine at the cleavage site between HA1 and HA2 instead of arginine. Experimental infection of domestic poultry and ferrets with A/Mallard/Gurjev/263/82 (H14N5) showed that the virus is avirulent for these animals. Based on comparative sequence analysis of different HA genes, it is suggested that differences of 30% or more at the amino acid level in HA1 constitute separate subtypes. Phylogenetic analysis of representatives of each HA subtype showed that H14 is one of the most recently diverged lineages while H8 and H12 branched off early during the evolution of the HA subtypes. These latter two subtypes (H8 and H12) have been isolated very infrequently in recent years, suggesting that these old subtypes may be disappearing from the influenza reservoirs in nature.
Insights
Two new influenza A virus subtypes, designated H14, were discovered in mallard ducks. These viruses possess unique hemagglutinin (HA) proteins and may represent a recently diverged lineage, unlike older subtypes H8 and H12.
Area of Science:
- Virology
- Molecular Biology
- Immunology
Background:
- Influenza A viruses are classified into subtypes based on their hemagglutinin (HA) and neuraminidase (NA) proteins.
- Existing HA subtypes are defined by antigenic and genetic differences, with significant amino acid divergence often indicating a new subtype.
- Avian influenza viruses are a diverse reservoir for novel influenza strains.
Purpose of the Study:
- To characterize two newly isolated influenza A viruses from mallard ducks.
- To determine if these viruses represent a previously unrecognized HA subtype.
- To investigate the evolutionary relationship and unique features of the novel HA subtype.
Main Methods:
- Antigenic analysis using hemagglutination inhibition and double immunodiffusion tests.
- Nucleotide and amino acid sequence analysis of HA genes.
- Experimental infection of domestic poultry and ferrets.
- Phylogenetic analysis of HA gene sequences.
Main Results:
- Two influenza A viruses with distinct HA properties were isolated from mallard ducks.
- Antigenic and sequence analyses confirmed these viruses belong to a new HA subtype, designated H14.
- H14 HA proteins exhibit unique characteristics, including lysine at the HA1/HA2 cleavage site, and differ significantly at the amino acid level from other subtypes.
- The H14 virus was found to be avirulent in domestic poultry and ferrets.
- Phylogenetic analysis suggests H14 is a recently diverged lineage, while H8 and H12 are ancient and potentially disappearing subtypes.
Conclusions:
- The discovery of H14 represents a new HA subtype of influenza A virus.
- The unique molecular features of H14 HA may have implications for viral evolution and classification.
- The findings contribute to understanding the diversity and evolution of influenza A viruses in natural reservoirs.
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