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Published on: April 1, 2019
Genetic polymorphisms of VKORC1, CYP2C9, CYP4F2 in Bai, Tibetan Chinese
1School of Pharmaceutical Sciences, Sun Yat-sen University Guangzhou, China.
Insights
Genetic variations in VKORC1, CYP2C9, and CYP4F2 influence warfarin dosing. Bai Chinese individuals exhibit a significantly higher VKORC1 3673G > A A-allele frequency compared to Han Chinese.
Area of Science:
- Pharmacogenomics
- Genetic Polymorphisms
- Drug Metabolism
Background:
- Warfarin dosing variability is influenced by VKORC1, CYP2C9, and CYP4F2 gene polymorphisms.
- Existing warfarin dosing algorithms often overlook ethnic-specific genetic variations.
- Research on warfarin-related gene polymorphisms in Chinese populations has primarily focused on the Han ethnicity.
Purpose of the Study:
- To investigate common polymorphisms in VKORC1, CYP2C9, and CYP4F2 genes among Bai and Tibetan Chinese populations.
- To compare these frequencies with those in the Han Chinese population.
- To inform personalized warfarin dosing strategies for Chinese ethnic minorities.
Main Methods:
- Polymerase Chain Reaction (PCR)-based methods were employed.
- Analysis of VKORC1 3673G > A, CYP2C9*3, and CYP4F2 rs2108622 C > T polymorphisms.
- Genotyping was performed on Han, Bai, and Tibetan Chinese individuals.
Main Results:
- No statistically significant differences in mutation frequencies were observed for the studied genes across the three ethnic groups.
- The A-allele frequency for VKORC1 3673G > A was high across all groups (Bai: 92.8%, Tibetan: 90.2%, Han: 90.8%).
- CYP2C9*3 allele frequency was low in all ethnic groups, and approximately one-fourth of each group carried the mutant T-allele of CYP4F2 rs108622.
- Bai Chinese demonstrated a statistically significant higher A-allele frequency of VKORC1 3673G > A compared to previously studied Han Chinese.
Conclusions:
- Bai Chinese individuals possess a significantly higher A-allele frequency for the VKORC1 3673G > A polymorphism.
- These findings highlight ethnic-specific genetic variations relevant to warfarin pharmacogenomics in China.
- Further research is warranted to optimize warfarin dosing for diverse Chinese ethnic groups.
Background:
VKORC1, CYP2C9 and CYP4F2 are three critical genes associated with inter-individual variation of warfarin dose. Many dosing algorithms containing these gene polymorphisms and demographic characteristics have been set up for better use of warfarin. However, with distinct gene mutation frequencies among different ethnics, dosing algorithms differ greatly. For Chinese, related research just concentrate on Han Chinese, ignoring other Chinese ethnicities. This study aims to detect the popular polymorphisms in these three critical genes in Bai, Tibetan Chinese, to start the exploration of better use of warfarin in Chinese minorities.
Methods:
PCR-based methods were used to analyze VKORC1 3673G > A, CYP2C9*3, CYP4F2 rs2108622 C > T in Han, Bai and Tibetan Chinese.
Results:
The differences among the mutation frequencies of the studied genes in three ethnicities were not statistically significant. The frequency of A-allele of VKORC1 3673G > A was 92.8%, 90.2%, 90.8% in Bai, Tibetan, Han Chinese, respectively. The frequency of *3-allele in CYP2C9*3 was low in Bai (4.5%), Tibetan (2.8%) and Han Chinese (4.6%). Approximately one fourth of each ethnic had the mutant T-allele of CYP4F2 rs108622. However, Bai Chinese got statistically higher A-allele frequency of VKORC1 3673G > A than previously studied Han Chinese did.
Conclusions:
Bai Chinese got significant higher A-allele frequency of VKORC1 3673G > A.
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