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Updated: May 24, 2026

Realistic Membrane Modeling Using Complex Lipid Mixtures in Simulation Studies
Published on: September 1, 2023
Computer simulation studies of self-assembling macromolecules
Wataru Shinoda1, Russell DeVane, Michael L Klein
1Nanosystem Research Institute, National Institute of Advanced Industrial Science and Technology, Central-2, 1-1-1 Umezono, Tsukuba, Ibaraki 305-8568, Japan. w.shinoda@aist.go.jp
Abstract:
Coarse-grained (CG) molecular models are now widely used to understand the structure and functionality of macromolecular self-assembling systems. In the last few years, significant efforts have been devoted to construct quantitative CG models based on data from molecular dynamics (MD) simulations with more detailed all-atom (AA) intermolecular force fields as well as experimental thermodynamic data. We review some of the recent progress pertaining to the MD simulation of self-assembling macromolecular systems, using as illustrations the application of CG models to probe surfactant and lipid self-assembly including liposome and dendrimersome formation as well as the interaction of biomembranes with nanoparticles.

